Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02] 9,402 sequences; 286,766,519 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq1672 82.4 7e-11 >seq1672 Length=38749 Score = 82.4 bits (90), Expect = 7e-11 Identities = 104/140 (74%), Gaps = 6/140 (4%) Strand=Plus/Minus Query 13312 TAAAAATCAACATCTAATGAAAAAAC-ATT--ATCGTCTTTGTTAGAAATAACGCCCATT 13368 ||||||||| |||| | | ||| || ||| ||| | |||||| || || || Sbjct 33148 TAAAAATCAGCATCCAGGGTAAATACCATTTCATCCTTTTTGTTC---ATGACTCCTGCC 33092 Query 13369 TTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTT 13428 ||||| || || | ||| | |||||||| ||||| ||||| ||||||||||| |||| Sbjct 33091 TTTTGGTACTCGCCAACCTTCTTTTCAAAGAAGTTTGTTTTGCCTTCCAGTGAGATATGC 33032 Query 13429 TCCATAAAATCGAATGGATT 13448 ||||||||||| || ||||| Sbjct 33031 TCCATAAAATCAAAGGGATT 33012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478532553851280