Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02]
9,402 sequences; 286,766,519 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq1672 89.7 4e-13
>seq1672
Length=38749
Score = 89.7 bits (98), Expect = 4e-13
Identities = 97/129 (75%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 13187 ATTAGCTCGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATA 13246
|| |||||||| ||| || || || |||||||| || || || || | ||| || ||
Sbjct 32582 ATAAGCTCGTTACTAAAGGTCAGGCCTGGCATAAGTCCACGCTTCTTGAGCCAGAAGATG 32523
Query 13247 GCAGCAAACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCA 13306
| ||||| || || |||||||| ||||||||||||||||| || |||| |||||||
Sbjct 32522 GATGCAAAGCTTCCAGAGAAAAATATCCCTTCAACTGCTGCAAAAGCAATCACCCTTTCA 32463
Query 13307 CCATACGTA 13315
|| | |||
Sbjct 32462 GCAAAAGTA 32454
Score = 86.0 bits (94), Expect = 5e-12
Identities = 148/215 (69%), Gaps = 5/215 (2%)
Strand=Plus/Minus
Query 13396 ATAAtttttttCCTTACTG-----TCTAAAATATAAGTATCTATCAATAAGCTATACATT 13450
||||||| || |||| ||| || ||| || || || ||||| | | ||||||
Sbjct 32272 ATAATTTATTACCTTTCTGCAACATCCTTAATGTACGTGTCAATCAAAAGGGAGTACATT 32213
Query 13451 TCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACC 13510
|| ||||| | |||||||||||| || || || || ||||| |||| || || | ||
Sbjct 32212 TCGGAATGCACATTTTCCATCGCAATCTGAAATCCGTAAAAGCATCGGGCTTCGGTGACT 32153
Query 13511 TGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGCa 13570
|| ||||| | |||| || | |||||||||||||| || || ||| || |||
Sbjct 32152 TGCACTTCCTGGCTGAATCGCTCCACCAAGTTTTCGTTAACAATTCCATCAGATGCTGCA 32093
Query 13571 aaaaaaGCAAGTATGTGCTTAATAAAttttttttC 13605
|| || || | | || ||||||||| ||||
Sbjct 32092 AAGAAGGCCAAGACATGGGAAATAAATTTCCTTTC 32058
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430933015073604
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |