Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02]
9,402 sequences; 286,766,519 total letters
Query= NC_005906.1
Length=81755
Score E
Sequences producing significant alignments: (Bits) Value
seq4812 100 1e-16
seq2144 98.7 5e-16
seq977 98.7 5e-16
seq328 98.7 5e-16
seq3249 91.5 8e-14
seq437 82.4 4e-11
seq93 82.4 4e-11
>seq4812
Length=13552
Score = 100 bits (110), Expect = 1e-16
Identities = 78/93 (84%), Gaps = 3/93 (3%)
Strand=Plus/Plus
Query 11437 AATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTA 11496
|| ||| |||||| |||||||| ||| |||||||||| ||||||| |||||||||
Sbjct 5418 AAATAAGCAAAAAT---ATTGGCCCGTGAGGGGATCGAACCCGCGACCTTGGCGTTATTA 5474
Query 11497 GCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529
|||| ||||||| |||||||||||||| |||||
Sbjct 5475 GCACCACGCTCTAACCAACTGAGCTAACGGGCC 5507
>seq2144
Length=30672
Score = 98.7 bits (108), Expect = 5e-16
Identities = 73/85 (86%), Gaps = 1/85 (1%)
Strand=Plus/Minus
Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504
|||||| |||| ||||| ||| |||||||||| ||||||| ||||||||||||| |||
Sbjct 11638 AAAAATGAAAT-GGCCCGTGAGGGGATCGAACCCGCGACCTTGGCGTTATTAGCACCACG 11580
Query 11505 CTCTRACCAACTGAGCTAATGGGCC 11529
|||| |||| ||||||||| |||||
Sbjct 11579 CTCTAACCAGCTGAGCTAACGGGCC 11555
>seq977
Length=63092
Score = 98.7 bits (108), Expect = 5e-16
Identities = 73/85 (86%), Gaps = 1/85 (1%)
Strand=Plus/Minus
Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504
|||||| ||| |||||| ||| |||||||||| ||||||| ||||||||||||| |||
Sbjct 34782 AAAAAT-AAAGTGGCCCGTGAGGGGATCGAACCCGCGACCTTGGCGTTATTAGCACCACG 34724
Query 11505 CTCTRACCAACTGAGCTAATGGGCC 11529
|||| |||| ||||||||| |||||
Sbjct 34723 CTCTAACCAGCTGAGCTAACGGGCC 34699
>seq328
Length=140176
Score = 98.7 bits (108), Expect = 5e-16
Identities = 78/94 (83%), Gaps = 4/94 (4%)
Strand=Plus/Plus
Query 11436 GAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATT 11495
|| || |||||||| | |||||| ||| |||||||||| ||||||| ||||||||
Sbjct 23221 GATTTGATAAAAAA----AGTGGCCCGTGAGGGGATCGAACCCGCGACCTTGGCGTTATT 23276
Query 11496 AGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529
||||| ||||||| |||||||||||||| |||||
Sbjct 23277 AGCACCACGCTCTAACCAACTGAGCTAACGGGCC 23310
Score = 89.7 bits (98), Expect = 3e-13
Identities = 67/78 (86%), Gaps = 1/78 (1%)
Strand=Plus/Minus
Query 11452 AAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRAC 11511
||| |||||| ||| |||||||||| ||||||| ||||||||||||| ||||||| |
Sbjct 22906 AAAGTGGCCCGTGAGGGGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAA- 22848
Query 11512 CAACTGAGCTAATGGGCC 11529
|||||||||||| |||||
Sbjct 22847 CAACTGAGCTAACGGGCC 22830
>seq3249
Length=20292
Score = 91.5 bits (100), Expect = 8e-14
Identities = 64/74 (86%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515
|||||| ||| |||||||||| ||||||| ||||||||||||| ||||||| |||| |
Sbjct 13604 TGGCCCGTGAGGGGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAGC 13545
Query 11516 TGAGCTAATGGGCC 11529
|||||||| |||||
Sbjct 13544 TGAGCTAACGGGCC 13531
>seq437
Length=118529
Score = 82.4 bits (90), Expect = 4e-11
Identities = 55/62 (89%), Gaps = 0/62 (0%)
Strand=Plus/Plus
Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527
|||||||||| ||||||| ||||||||||||| ||||||| ||||||||||||| |||
Sbjct 19577 GGATCGAACCGACGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAGCGGG 19636
Query 11528 CC 11529
||
Sbjct 19637 CC 19638
>seq93
Length=313529
Score = 82.4 bits (90), Expect = 4e-11
Identities = 64/77 (83%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 11446 AAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGC 11505
|||| || | |||||| | |||||||||| ||||||| ||||||||||||| ||||
Sbjct 114012 AAAAGCATAATGGCCCGCGCCGGGATCGAACCGACGACCTTGGCGTTATTAGCACCACGC 113953
Query 11506 TCTRACCAACTGAGCTA 11522
||| |||||||||||||
Sbjct 113952 TCTAACCAACTGAGCTA 113936
Lambda K H
0.639 0.410 0.921
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 261461236540552
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |