Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02] 9,402 sequences; 286,766,519 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq159 118 1e-21 seq263 114 1e-20 seq463 111 1e-19 seq47 89.7 5e-13 >seq159 Length=219009 Score = 118 bits (130), Expect = 1e-21 Identities = 145/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870 |||||||||||||| | || || ||||| | ||| ||| |||| ||| ||||| Sbjct 157528 GTAGATTCCTTTTGGATATTGTAGTCGCTGAGGGTGCGACCATCTTCCAACTGCTTTCCA 157469 Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930 ||||||| | | ||| |||||||| ||||| ||||| || || | ||| |||||||| Sbjct 157468 GCAAAGATGAGACGTTGTTGATCTGGGGGAATGCCTTCCTTATCTTGAATCTTTGCCTTC 157409 Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990 || ||| |||||||| | || || |||| ||||| || || ||||| || || Sbjct 157408 ACATTTTCGATAGTGTCAGAAGGCTCCACCTCAAGGGTGATCGTCTTGCCAGTGAGTGTC 157349 Query 94991 TTCACAAAGATCTGCATG 95008 ||||| || ||||||||| Sbjct 157348 TTCACGAAAATCTGCATG 157331 Score = 118 bits (130), Expect = 1e-21 Identities = 146/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 94810 AGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCC 94869 ||| || |||||||| | ||| || ||||| | || | |||||| || || ||||| Sbjct 157757 AGTGGACTCCTTTTGGATGTTGTAGTCGCTGAGGGTACGGCCATCCTCAAGTTGCTTTCC 157698 Query 94870 GCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTT 94929 ||||||| || | ||||| ||||| ||||| ||||| ||||| | || || ||||| Sbjct 157697 AGCAAAGATCAAACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCTTGGATCTTAGCCTT 157638 Query 94930 GACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGT 94989 ||| | | ||||||| | || || |||| ||||| || |||||||| | ||| Sbjct 157637 GACATTTTCAATGGTGTCAGAAGGCTCCACCTCAAGGGTGATCGTCTTTCCAGTCAAAGT 157578 Query 94990 TTTCACAAAGATCTGCATGC 95009 || |||||||||||||||| Sbjct 157577 CTTGACAAAGATCTGCATGC 157558 Score = 116 bits (128), Expect = 3e-21 Identities = 147/201 (73%), Gaps = 1/201 (0%) Strand=Plus/Minus Query 94810 AGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCC 94869 ||| || |||||||| | ||| || ||||| | || | |||||| || || ||||| Sbjct 159446 AGTGGACTCCTTTTGGATGTTGTAGTCGCTGAGGGTTCGGCCATCCTCAAGTTGCTTTCC 159387 Query 94870 GCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTT 94929 ||||||| || | ||||| ||||| ||||| ||||| ||||| | || || ||||| Sbjct 159386 AGCAAAGATCAAACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCTTGGATCTTAGCCTT 159327 Query 94930 GACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGT-TTTTCCAGTAAGAG 94988 ||| | | ||||||| | || || |||| ||||| || ||||||||| | || Sbjct 159326 GACATTTTCAATGGTGTCAGAAGGCTCCACCTCAAGGGTGATCGTCTTTTCCAGTCAAAG 159267 Query 94989 TTTTCACAAAGATCTGCATGC 95009 | || |||||||||||||||| Sbjct 159266 TCTTGACAAAGATCTGCATGC 159246 Score = 111 bits (122), Expect = 1e-19 Identities = 145/199 (73%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA--TCCTCCAGCTGTTTTC 94868 || ||||| ||||| | |||||| || | | | |||| | || |||| ||| |||| Sbjct 158211 GTGGATTCTTTTTGAATGTTATAGTC--TGACAATGTTCGGCCGTCTTCCAACTGCTTTC 158154 Query 94869 CGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCT 94928 | ||||||| | | ||||||||||| || |||||||| || || | ||| || |||| Sbjct 158153 CAGCAAAGATGAGACGCTGCTGATCTGGGGGGATACCTTCCTTATCTTGAATCTTAGCCT 158094 Query 94929 TGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAG 94988 | || ||| ||||||| | | || || || | |||||||| ||||| ||||| | Sbjct 158093 TAACATTTTCGATGGTGTCAGAGGGCTCCACTTCCAATGTGATGGTCTTTCCTGTAAGGG 158034 Query 94989 TTTTCACAAAGATCTGCAT 95007 | || |||||||||||||| Sbjct 158033 TCTTGACAAAGATCTGCAT 158015 Score = 109 bits (120), Expect = 5e-19 Identities = 143/197 (73%), Gaps = 1/197 (1%) Strand=Plus/Minus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870 || || ||||| || | ||| || ||||| | || | |||||| || || ||||| Sbjct 157983 GTGGACTCCTTCTGGATGTTGTAGTCGCTGAGGGTACGGCCATCCTCAAGTTGCTTTCCA 157924 Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930 ||||||| || | || || ||||| ||||| ||||| || || | ||| || ||||| Sbjct 157923 GCAAAGATCAAACGCTGTTG-TCTGGGGGAATTCCTTCCTTATCTTGAATCTTGGCCTTA 157865 Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990 ||| ||| |||||||| | | || || || | ||||| || ||||| ||||| || Sbjct 157864 ACGTTTTCGATAGTGTCAGAGGGTTCCACCTCCAATGTGATAGTCTTTCCTGTAAGCGTC 157805 Query 94991 TTCACAAAGATCTGCAT 95007 || |||||||||||||| Sbjct 157804 TTAACAAAGATCTGCAT 157788 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870 |||||||||||||| | || || ||||| | ||| ||| |||| ||| ||||| Sbjct 158988 GTAGATTCCTTTTGGATATTGTAGTCGCTGAGGGTGCGACCATCTTCCAACTGCTTTCCA 158929 Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930 ||||||| | | || |||||||| ||||| ||||| || || | ||| || ||||| Sbjct 158928 GCAAAGATGAGACGCTGTTGATCTGGGGGAATGCCTTCCTTATCTTGAATCTTGGCCTTA 158869 Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990 || ||| ||||| | | || || |||| ||||||||||| |||||||| || Sbjct 158868 ACATTTTCGATGGTGTCGGAAGGCTCCACCTCAAGAGTGATGGTTTTGCCAGTAAGGGTC 158809 Query 94991 TTCACAAAGATCTGCAT 95007 || ||||| || ||||| Sbjct 158808 TTGACAAAAATTTGCAT 158792 Score = 105 bits (116), Expect = 6e-18 Identities = 144/199 (72%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTC 94868 || ||||| ||||| | || || ||||| | | || || |||||| || || |||| Sbjct 158760 GTGGATTCTTTTTGGATATTGTAGTCGCTGA--GGGTACGACCATCCTCAAGTTGCTTTC 158703 Query 94869 CGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCT 94928 | ||||||| | | ||||||||||| ||||||||||| || || | || ||||||| Sbjct 158702 CAGCAAAGATGAGACGCTGCTGATCTGGGGGAATACCTTCCTTATCTTGGATCTTTGCCT 158643 Query 94929 TGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAG 94988 |||| ||| |||||| | | || || || | |||||||| |||||||| | | Sbjct 158642 TGACATTCTCGATCGTGTCACTGGGTTCCACCTCTAAAGTGATGGTCTTTCCAGTCAACG 158583 Query 94989 TTTTCACAAAGATCTGCAT 95007 | || || ||||||||||| Sbjct 158582 TCTTGACGAAGATCTGCAT 158564 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870 || || ||||| || | || || ||||| | || | |||||| || || ||||| Sbjct 159673 GTGGACTCCTTCTGGATATTGTAGTCGCTGAGGGTACGGCCATCCTCAAGTTGCTTTCCA 159614 Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930 ||||||| || | || || ||||| || || ||||| ||||| | ||| || ||||| Sbjct 159613 GCAAAGATCAAACGCTGTTGGTCTGGGGGGATTCCTTCCTTGTCTTGAATCTTGGCCTTA 159554 Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990 ||| ||| |||||||| | | || || || | ||||| || ||||| ||||| || Sbjct 159553 ACGTTTTCGATAGTGTCAGAGGGTTCCACCTCCAATGTGATAGTCTTTCCTGTAAGCGTC 159494 Query 94991 TTCACAAAGATCTGCAT 95007 || || ||||||||||| Sbjct 159493 TTAACGAAGATCTGCAT 159477 Score = 100 bits (110), Expect = 3e-16 Identities = 117/158 (74%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 ||| |||| ||||| || ||||||| | | ||||| ||||| ||||| ||||| || Sbjct 159175 ATCTTCCAATTGTTTGCCAGCAAAGATAAGACGCTGCTGGTCTGGGGGAATGCCTTCCTT 159116 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 ||| | || || |||||||| ||| |||||| | | || || || | ||||| Sbjct 159115 GTCTTGGATCTTGGCCTTGACATTCTCGATCGTGTCACTGGGTTCTACCTCTAAGGTGAT 159056 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 ||| |||||||| | |||||| || ||||||||||||| Sbjct 159055 GGTCTTTCCAGTCAAAGTTTTGACGAAGATCTGCATGC 159018 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/208 (70%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 94801 CAAG-TGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCA 94859 |||| |||| ||| |||||||| || | || ||||| | ||| |||||||| Sbjct 159912 CAAGATGCAGAGTCGATTCCTTCTGAATATTGTAATCAGAGAGAGTACGTCCATCCTCCA 159853 Query 94860 GCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAA 94919 |||||| || |||| || | | || || ||||| ||||||||||| || || | | Sbjct 159852 ACTGTTTACCAGCAAAAATAAGACGCTGTTGGTCTGGGGGAATACCTTCCTTATCTTGGA 159793 Query 94920 TTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTC 94979 | || |||||||| ||| ||||| | | || || || | |||||||| |||| Sbjct 159792 TCTTGGCCTTGACATTCTCGATCGTGTCGCTGGGTTCTACCTCCAAAGTGATGGTCTTTC 159733 Query 94980 CAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||| | ||| || || ||||||||||| Sbjct 159732 CAGTCAAAGTCTTGACGAAGATCTGCAT 159705 >seq263 Length=158529 Score = 114 bits (126), Expect = 1e-20 Identities = 151/208 (73%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 94801 CAAG-TGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCA 94859 |||| ||||| || || |||||||| | ||| || || || | || | ||| || | Sbjct 64844 CAAGATGCAACGTTGACTCCTTTTGAATGTTGTAGTCACTAAGGGTCCTACCATCTTCGA 64903 Query 94860 GCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAA 94919 ||||||| ||| ||||||| || | || || ||||| || || || || ||||| | | Sbjct 64904 GCTGTTTACCGGCAAAGATCAAACGCTGTTGGTCTGGGGGGATTCCCTCCTTGTCTTGGA 64963 Query 94920 TTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTC 94979 | || |||||||| ||| ||| ||| | | || || |||| ||||| ||||| | Sbjct 64964 TCTTGGCCTTGACATTTTCGATAGTATCACTGGGTTCAACCTCAAGGGTGATAGTTTTCC 65023 Query 94980 CAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||| | |||||||||||||||||||| Sbjct 65024 CAGTCAATGTTTTCACAAAGATCTGCAT 65051 >seq463 Length=112955 Score = 111 bits (122), Expect = 1e-19 Identities = 141/192 (73%), Gaps = 4/192 (2%) Strand=Plus/Minus Query 94818 CCTTTTGCACGTTATAATCGCTCATAGTGT--TGGAATCCTCCAGCTGTTTTCCGCCAAA 94875 ||||||| | ||| |||||| | ||||| | |||||| || ||||||||| |||| Sbjct 58491 CCTTTTGAATGTTGTAATCGG--AGAGTGTCCTTCCATCCTCGAGTTGTTTTCCGGCAAA 58434 Query 94876 GATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGC 94935 ||| || | |||||||| || || || || || ||||| | || || |||||||| Sbjct 58433 GATCAACCGCTGCTGATCCGGGGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 58374 Query 94936 GCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCAC 94995 ||| |||||| | | || || |||| |||||||||||| || || || ||||| || Sbjct 58373 CTCGATCGTGTCACTGGGTTCCACCTCAAGCGTGATGGTTTTACCCGTGAGGGTTTTAAC 58314 Query 94996 AAAGATCTGCAT 95007 || |||||||| Sbjct 58313 GAAAATCTGCAT 58302 >seq47 Length=390960 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870 ||||| |||||||| | ||| ||||| | || | |||||||| |||||| || Sbjct 276737 GTAGACTCCTTTTGAATGTTGTAATCAGAAAGGGTACGGCCATCCTCCAACTGTTTACCA 276796 Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930 |||| || | | ||||| ||||| || || ||||| || || | || || ||||| Sbjct 276797 GCAAAAATAAGACGCTGCTGGTCTGGTGGGATCCCTTCCTTATCCTGGATCTTGGCCTTC 276856 Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990 || | | |||||| | | || || || | |||||||| || ||||||||||| Sbjct 276857 ACATTTTCAATGGTGTCACTGGGTTCCACCTCGAGAGTGATGGTCTTGCCAGTAAGAGTC 276916 Query 94991 TTCACAAAGATCTGCAT 95007 || ||||| |||||||| Sbjct 276917 TTGACAAAAATCTGCAT 276933 Score = 87.8 bits (96), Expect = 2e-12 Identities = 139/198 (70%), Gaps = 1/198 (1%) Strand=Plus/Plus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTT-CC 94869 ||||| |||||||| | ||| ||||| | || | |||||||| ||||||| || Sbjct 276281 GTAGACTCCTTTTGAATGTTGTAATCAGAAAGGGTACGGCCATCCTCCAACTGTTTTACC 276340 Query 94870 GCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTT 94929 |||| || | | ||||| ||||| || || ||||| || || | || || ||||| Sbjct 276341 AGCAAAAATAAGACGCTGCTGGTCTGGTGGGATCCCTTCCTTATCCTGGATCTTGGCCTT 276400 Query 94930 GACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGT 94989 || | | |||||| | | || || || | |||||||| || ||||||||||| Sbjct 276401 CACATTTTCAATGGTGTCACTGGGTTCCACCTCGAGAGTGATGGTCTTGCCAGTAAGAGT 276460 Query 94990 TTTCACAAAGATCTGCAT 95007 || ||||| |||||||| Sbjct 276461 CTTGACAAAAATCTGCAT 276478 Score = 82.4 bits (90), Expect = 7e-11 Identities = 139/199 (70%), Gaps = 3/199 (2%) Strand=Plus/Plus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870 ||||| |||||||| | ||| ||||| | || | |||||||| ||||||||| Sbjct 277431 GTAGACTCCTTTTGAATGTTGTAATCAGAAAGGGTACGGCCATCCTCCAACTGTTTTCCA 277490 Query 94871 CCAAAGATTAATCTTTGCTGA--TCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCT 94928 ||||||| | | ||| | ||||| ||| | ||||| || || | || || |||| Sbjct 277491 GCAAAGATAAGACGCTGCCGGCGTCTGGTGGA-TCCCTTCCTTATCCTGGATCTTGGCCT 277549 Query 94929 TGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAG 94988 | || | | |||||| | | || || || | |||||||| || |||||||||| Sbjct 277550 TCACATTTTCAATAGTGTCTGAAGGCTCCACCTCGAGAGTGATGGTCTTGCCAGTAAGAG 277609 Query 94989 TTTTCACAAAGATCTGCAT 95007 | || ||||| |||||||| Sbjct 277610 TCTTGACAAAAATCTGCAT 277628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448238514576720