Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02]
9,402 sequences; 286,766,519 total letters
Query= NC_006883.2
Length=252401
Score E
Sequences producing significant alignments: (Bits) Value
seq118 89.7 8e-13
>seq118
Length=272213
Score = 89.7 bits (98), Expect = 8e-13
Identities = 165/237 (70%), Gaps = 10/237 (4%)
Strand=Plus/Minus
Query 193881 GCAAAGTTGTATGGTTATTGGATCATCAAGAATTATCGTGAGTCATATGGATTCCACGCT 193940
|||||| | || | ||| ||||| | | || ||||| || |||||||| | | ||
Sbjct 111364 GCAAAGCTATACGCTTACTGGATAGTAACTAACTATCGCGAAGCATATGGAATGTATGCA 111305
Query 193941 AGTTCTGGTATTCTCTTCAATCACGAATCTCCAAGAAGAGGTGAGACATTTGTAACTCGT 194000
| ||| ||| | |||||||||||| ||||||| ||||||| | ||||| || |
Sbjct 111304 TGCAATGGAATTTTATTCAATCACGAAAGTCCAAGACGAGGTGAAAACTTTGTTACCAGA 111245
Query 194001 AAGATTACACAAGGTT---TATCTAAGATCTCTGTTGGATTACA--GAAGATTCTTTATC 194055
|| ||||| | ||| || |||| || || |||| | | ||| ||| || | |
Sbjct 111244 AAAATTACCC---GTTCAGTAGCTAAAAT-TCACTTGGGACAAATTGAATATT-TTGAGC 111190
Query 194056 TTGGTAATCTTAATGCTAAGAGGGATTGGGGACACGCAAAGGATTATGTTGAAGCGA 194112
|||| ||| | | ||||| || ||||||||||| || | || |||||||||| ||
Sbjct 111189 TTGGAAATTTGGACGCTAAAAGAGATTGGGGACATGCCAGAGACTATGTTGAAGTGA 111133
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 807460292075120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |