Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02] 9,402 sequences; 286,766,519 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq118 89.7 8e-13 >seq118 Length=272213 Score = 89.7 bits (98), Expect = 8e-13 Identities = 165/237 (70%), Gaps = 10/237 (4%) Strand=Plus/Minus Query 193881 GCAAAGTTGTATGGTTATTGGATCATCAAGAATTATCGTGAGTCATATGGATTCCACGCT 193940 |||||| | || | ||| ||||| | | || ||||| || |||||||| | | || Sbjct 111364 GCAAAGCTATACGCTTACTGGATAGTAACTAACTATCGCGAAGCATATGGAATGTATGCA 111305 Query 193941 AGTTCTGGTATTCTCTTCAATCACGAATCTCCAAGAAGAGGTGAGACATTTGTAACTCGT 194000 | ||| ||| | |||||||||||| ||||||| ||||||| | ||||| || | Sbjct 111304 TGCAATGGAATTTTATTCAATCACGAAAGTCCAAGACGAGGTGAAAACTTTGTTACCAGA 111245 Query 194001 AAGATTACACAAGGTT---TATCTAAGATCTCTGTTGGATTACA--GAAGATTCTTTATC 194055 || ||||| | ||| || |||| || || |||| | | ||| ||| || | | Sbjct 111244 AAAATTACCC---GTTCAGTAGCTAAAAT-TCACTTGGGACAAATTGAATATT-TTGAGC 111190 Query 194056 TTGGTAATCTTAATGCTAAGAGGGATTGGGGACACGCAAAGGATTATGTTGAAGCGA 194112 |||| ||| | | ||||| || ||||||||||| || | || |||||||||| || Sbjct 111189 TTGGAAATTTGGACGCTAAAAGAGATTGGGGACATGCCAGAGACTATGTTGAAGTGA 111133 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807460292075120