Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02] 9,402 sequences; 286,766,519 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq1672 86.0 7e-12 >seq1672 Length=38749 Score = 86.0 bits (94), Expect = 7e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 21770 TACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCT 21829 |||||||| ||||| | |||||| ||||| ||||||||||||||||| |||| || || Sbjct 32218 TACATTTCGGAATGCACATTTTCCATCGCAATCTGAAATCCGTAAAAGCATCGGGCTTCG 32159 Query 21830 GAACATTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACTG 21889 | ||| || || ||||| | |||||||||| || || ||||||||| Sbjct 32158 GTGACTTGCACTTCCTGGCTGAATCGCTCCACCAAGTTTTCGTTAACAATTCCATCAGAT 32099 Query 21890 GCGGCAAAAAATGCCAA 21906 || ||||| || ||||| Sbjct 32098 GCTGCAAAGAAGGCCAA 32082 Score = 82.4 bits (90), Expect = 8e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 21126 TTTAAAAATCAGCATCTAATGAGAAAACATTATCTTCtttttttGACATAATTCCCATTT 21185 |||||||||||||||| | | || || | || || ||||| ||| | ||| | Sbjct 33150 TTTAAAAATCAGCATCCAGGGTAAATACCATTTCATCCTTTTTGTTCATGACTCCTGCCT 33091 Query 21186 TTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGATT 21245 |||| || || | ||| | ||||| || || ||||| || ||||||| ||| ||| | Sbjct 33090 TTTGGTACTCGCCAACCTTCTTTTCAAAGAAGTTTGTTTTGCCTTCCAGTGAGATATGCT 33031 Query 21246 CCATAAAATCAAATGGATTTTCA 21268 ||||||||||||| ||||| ||| Sbjct 33030 CCATAAAATCAAAGGGATTCTCA 33008 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531838288358480