Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02]
9,402 sequences; 286,766,519 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq1326 122 1e-22
seq1672 113 6e-20
>seq1326
Length=48828
Score = 122 bits (134), Expect = 1e-22
Identities = 121/157 (77%), Gaps = 0/157 (0%)
Strand=Plus/Minus
Query 62337 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACC 62396
|| |||||||||||||| || ||||||| || |||||||| || || | ||| |
Sbjct 34369 ACCTGAAATTCTCCAGATAACACTCTCCTCGTATAAATATTTGAAGTGTATGCTTCAATG 34310
Query 62397 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62456
|||||||| || ||||||||||| ||||| |||||||| ||||| || |||| | ||||
Sbjct 34309 GACTCATTGTTGCCCAAAATTTGGGCAGTAGATGCAGTAGGCATTGGAGCCAAAAGTAAA 34250
Query 62457 CTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTA 62493
||||| |||||||| | || ||||| | |||||
Sbjct 34249 GAATTTCGAAGACCGTGTTGACTTATTTTCTGTTTTA 34213
Score = 107 bits (118), Expect = 2e-18
Identities = 197/287 (69%), Gaps = 9/287 (3%)
Strand=Plus/Minus
Query 62784 GGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACATCC 62843
||||| ||||| | || || ||||| || || ||||| | || || || |||
Sbjct 33753 GGATAGTAATTCACGTCGATGATTTTGTTCAGGTTTCTTGTGACCACCTTACTAACTTCC 33694
Query 62844 TTCAGTTTGAGAAAATCAAATCGCCCATC---TATTACAAACATGTTCAAGGCAACAGAT 62900
|||| ||| |||||| || | ||| | | ||| |||| |||| |||| ||||
Sbjct 33693 TTCAATTTCTTGAAATCATATGTGCGATCAGGTTTCACATACATATTCACAGCAATAGAT 33634
Query 62901 GCCAGATTACAAACGGCTACCTCAT---TAGCATCCGCATATTGTATTATCTCAGTGCAA 62957
|||| ||| || ||||||| |||| | | | | ||| | | ||| ||||||||
Sbjct 33633 GCCAAATTGCACACGGCTATTTCATCCTTTGAA---GAATACTCGACTATTTCAGTGCAC 33577
Query 62958 AGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 63017
| ||| ||| ||||| ||||| | ||| || ||||| ||| ||||||||||||
Sbjct 33576 AAATTTGAACATTTGATGGTTCCAAGATTCTGCTGATTGGATTTTCGATTACACGCATCC 33517
Query 63018 TTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAAT 63064
|| || | | | |||| || |||||||| || || ||||| |||||
Sbjct 33516 TTGTACAACAAGTATGGTGTTCCAGTTTCGATTTGGGATTCAATAAT 33470
Score = 105 bits (116), Expect = 8e-18
Identities = 166/235 (71%), Gaps = 2/235 (1%)
Strand=Plus/Minus
Query 63965 tttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATC 64024
||| ||||||||||| || | || || ||||| || ||||| || ||||| ||||||||
Sbjct 32200 TTTCTTTGTTTCCTTATGCAAGTTAGAAACGGCAATCCTGGCAGCAAGAATCGCATAATC 32141
Query 64025 CGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGT 64084
|||||| | |||||| |||| || || | || || |||| | |||| | ||| || ||
Sbjct 32140 CGGATGGTTTGTAGTTAAAGTAGCAGCAGTCTCAGCAGCCAAATTGTCAAGTTCCACAGT 32081
Query 64085 TGTTACTCCATTATATATTCCTTGAATAACCTTCATAGCTATTTTAATAGGATCTATATG 64144
||| |||||| || | || ||| ||||| | || ||| | ||| || | |
Sbjct 32080 TGTAACTCCAGAGTACAAGCCACTAATCACCTTGAGAGTGATTGCAGGAGGGTCCACAAA 32021
Query 64145 ATCCGTGTTTAAGCCATAACATAATTTTCT-AATACGAGACGTGATTTTATCAAA 64198
|||| |||| | ||||| || || |||| |||||| || || || |||||
Sbjct 32020 ATCCATGTTAAGCCCATAGCA-AAGCTTCTCAATACGGCTGGTTATCTTGTCAAA 31967
>seq1672
Length=38749
Score = 113 bits (124), Expect = 6e-20
Identities = 162/228 (71%), Gaps = 3/228 (1%)
Strand=Plus/Minus
Query 33564 ATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 33623
||| |||| || || || |||||||| |||||||| ||||| | ||||| || ||
Sbjct 32249 ATCCTTAATGTACGTGTCAATCAAAAGGGAGTACATTTCGGAATGCACATTTTCCATCGC 32190
Query 33624 CATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTC 33683
|||||||||||||| || |||| || ||||| | || ||||| | ||||| ||
Sbjct 32189 AATCTGAAATCCGTAAAAGCATCGGGCTTCGGTGACTTGCACTTCCTGGCTGAATCGCTC 32130
Query 33684 CGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTAT 33743
| |||| ||||| || || ||||| ||| |||||||| || ||||| ||||| ||
Sbjct 32129 CACCAAGTTTTCGTTAACAATTCCATCAGATGCTGCAAAGAAGGCCAAGACATGGGAAAT 32070
Query 33744 AAAATATTTTTCGTCTGGTGTTAG---TTTATTCCAATCATTGATATC 33788
||| | |||| || || | || || || ||||||| | ||||
Sbjct 32069 AAATTTCCTTTCATCCGGCTTCAGCTTTTGATCCCAATCAGTAGTATC 32022
Score = 87.8 bits (96), Expect = 2e-12
Identities = 78/98 (80%), Gaps = 0/98 (0%)
Strand=Plus/Minus
Query 33790 TTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTTC 33849
|| || | ||| ||||||||||| |||||||| || ||||| ||||| || ||||| | |
Sbjct 31924 TTTGAAAGATCCACTTCTTCCACAGTCCAAAAGGAAGCCTCGGCCTTCTTGTACATTTGC 31865
Query 33850 CAGATGTCATAATATTGGATTGGGAAAATAACAAATCT 33887
||||| |||| ||| || || ||||||| ||| || ||
Sbjct 31864 CAGATATCATGATACTGAATGGGGAAAACAACGAACCT 31827
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622873988130320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |