Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02] 9,402 sequences; 286,766,519 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq263 109 5e-19 seq159 100 3e-16 seq1326 89.7 5e-13 >seq263 Length=158529 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | ||||| |||||||| ||||| ||| | |||||| | || | ||| | | Sbjct 65051 ATGCAGATCTTTGTGAAAACATTGACTGGGAAAACTATCACCCTTGAGGTTGAACCCAGT 64992 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || || ||||| | ||||| ||||| ||||| || || || || || || ||| Sbjct 64991 GATACTATCGAAAATGTCAAGGCCAAGATCCAAGACAAGGAGGGAATCCCCCCAGACCAA 64932 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || | | || | | ||| ||||| |||||||||| ||| | | | || ||||| ||| Sbjct 64931 CAGCGTTTGATCTTTGCCGGTAAACAGCTCGAAGATGGTAGGACCCTTAGTGACTACAAC 64872 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGA 26996 |||||||| || || || | ||||| || || || ||| |||| ||| Sbjct 64871 ATTCAAAAGGAGTCAACGTTGCATCTTGTGCTCAGGCTTCGAGGTGGA 64824 >seq159 Length=219009 Score = 100 bits (110), Expect = 3e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 ||||||| | ||||| || || | ||||| ||| | ||||| | || | || | Sbjct 158791 AATGCAAATTTTTGTCAAGACCCTTACTGGCAAAACCATCACTCTTGAGGTGGAGCCTTC 158850 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 |||||||||||| | || || |||||| || || ||||| || || || ||||| Sbjct 158851 CGACACCATCGAAAATGTTAAGGCCAAGATTCAAGATAAGGAAGGCATTCCCCCAGATCA 158910 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 ||| | ||||| | | || || || | ||||||| | | | | |||||||||| || Sbjct 158911 ACAGCGTCTCATCTTTGCTGGAAAGCAGTTGGAAGATGGTCGCACCCTCAGCGACTACAA 158970 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || ||||| |||||||| ||||||| ||||| Sbjct 158971 TATCCAAAAGGAATCTACACTCCATCTCGTCCT 159003 Score = 98.7 bits (108), Expect = 1e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || || || || |||||||| | ||||| | || | ||| | | Sbjct 158564 ATGCAGATCTTCGTCAAGACGTTGACTGGAAAGACCATCACTTTAGAGGTGGAACCCAGT 158623 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| |||||| | ||||| |||||| || || ||||| || || || ||||| Sbjct 158624 GACACGATCGAGAATGTCAAGGCAAAGATCCAAGATAAGGAAGGTATTCCCCCAGATCAG 158683 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || | ||||| | | || || ||||| || |||| | | | | |||||||||| || Sbjct 158684 CAGCGTCTCATCTTTGCTGGAAAGCAACTTGAGGATGGTCGTACCCTCAGCGACTACAAT 158743 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 || ||||||||||| || | ||||| ||||| Sbjct 158744 ATCCAAAAAGAATCCACCCTTCATCTCGTCCT 158775 Score = 98.7 bits (108), Expect = 1e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || ||||| || |||||||| | |||||| | || ||||| | | Sbjct 159020 ATGCAGATCTTCGTCAAAACTTTGACTGGAAAGACCATCACCTTAGAGGTAGAACCCAGT 159079 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| |||||| | ||||| ||||| ||||| ||||| || || || || || Sbjct 159080 GACACGATCGAGAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATTCCCCCAGACCAG 159139 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || | || || | | ||||||||| | ||||||| | | | | ||||||||| Sbjct 159140 CAGCGTCTTATCTTTGCTGGCAAACAATTGGAAGATGGACGTACCCTTTCAGACTATAAC 159199 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||||| |||||||| || | ||||| ||||| Sbjct 159200 ATTCAGAAAGAATCCACCCTTCATCTCGTCCT 159231 >seq1326 Length=48828 Score = 89.7 bits (98), Expect = 5e-13 Identities = 181/264 (69%), Gaps = 6/264 (2%) Strand=Plus/Minus Query 148613 AGTGA-CATTCAGGCCGATGCCGCCTCCGTGTTTAGATATCATGGCACAATCGTTGAGTG 148671 ||||| |||| || |||||||| || || |||||| |||| || || | || || | Sbjct 32855 AGTGAACATTGAGTCCGATGCCACCAGCGCTTTTAGAAATCAATGCGCACTGCTTAAGAG 32796 Query 148672 TTTTATAGATGCCGTTAATACTGTCCTCTTGAATGTTAAGCAGGTAGCACGATGACATTT 148731 | | ||| || || | ||| ||||| || || || |||| ||| |||| || || | || Sbjct 32795 TATCATAAATTCCTTCAATGCTGTCTTCCTGCATTGTAAGAAGGAAGCAAGAGGAAAGTT 32736 Query 148732 GAGGCATTTTCATGCCAGACGAAAATAGAGTTGGACTAGCGTGAGTGAACAGCTTTGCCC 148791 |||| || | || ||| || ||||| | | |||||||||||| | | || | Sbjct 32735 GAGGTCTTGTAGTGGCAGCATTGAAAAGAGTCGAGAT-GCGTGAGTGAAC--CATCGCTC 32679 Query 148792 G--CATCAATCTATAGGATTCGATAGCGCTTTCGATGTCATCACCATGAATCTGTAGAGC 148849 ||| || | || | ||| ||||| || ||||||||| |||||||| | || Sbjct 32678 AGACATTAAATTGTAAGTTTCAATAGCCGCATCAATGTCATCATCATGAATCCCAATTGC 32619 Query 148850 TACACGCATCAGCATGTGTTGAGG 148873 || | ||| ||||||||||| || Sbjct 32618 AACTCTCATTAGCATGTGTTGTGG 32595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478606145201440