Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02]
9,402 sequences; 286,766,519 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq263 109 5e-19
seq159 100 3e-16
seq1326 89.7 5e-13
>seq263
Length=158529
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
||||| | ||||| |||||||| ||||| ||| | |||||| | || | ||| | |
Sbjct 65051 ATGCAGATCTTTGTGAAAACATTGACTGGGAAAACTATCACCCTTGAGGTTGAACCCAGT 64992
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|| || ||||| | ||||| ||||| ||||| || || || || || || |||
Sbjct 64991 GATACTATCGAAAATGTCAAGGCCAAGATCCAAGACAAGGAGGGAATCCCCCCAGACCAA 64932
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| | | || | | ||| ||||| |||||||||| ||| | | | || ||||| |||
Sbjct 64931 CAGCGTTTGATCTTTGCCGGTAAACAGCTCGAAGATGGTAGGACCCTTAGTGACTACAAC 64872
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGA 26996
|||||||| || || || | ||||| || || || ||| |||| |||
Sbjct 64871 ATTCAAAAGGAGTCAACGTTGCATCTTGTGCTCAGGCTTCGAGGTGGA 64824
>seq159
Length=219009
Score = 100 bits (110), Expect = 3e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827
||||||| | ||||| || || | ||||| ||| | ||||| | || | || |
Sbjct 158791 AATGCAAATTTTTGTCAAGACCCTTACTGGCAAAACCATCACTCTTGAGGTGGAGCCTTC 158850
Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887
|||||||||||| | || || |||||| || || ||||| || || || |||||
Sbjct 158851 CGACACCATCGAAAATGTTAAGGCCAAGATTCAAGATAAGGAAGGCATTCCCCCAGATCA 158910
Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947
||| | ||||| | | || || || | ||||||| | | | | |||||||||| ||
Sbjct 158911 ACAGCGTCTCATCTTTGCTGGAAAGCAGTTGGAAGATGGTCGCACCCTCAGCGACTACAA 158970
Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980
|| ||||| |||||||| ||||||| |||||
Sbjct 158971 TATCCAAAAGGAATCTACACTCCATCTCGTCCT 159003
Score = 98.7 bits (108), Expect = 1e-15
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
||||| | || || || || || |||||||| | ||||| | || | ||| | |
Sbjct 158564 ATGCAGATCTTCGTCAAGACGTTGACTGGAAAGACCATCACTTTAGAGGTGGAACCCAGT 158623
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
||||| |||||| | ||||| |||||| || || ||||| || || || |||||
Sbjct 158624 GACACGATCGAGAATGTCAAGGCAAAGATCCAAGATAAGGAAGGTATTCCCCCAGATCAG 158683
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| | ||||| | | || || ||||| || |||| | | | | |||||||||| ||
Sbjct 158684 CAGCGTCTCATCTTTGCTGGAAAGCAACTTGAGGATGGTCGTACCCTCAGCGACTACAAT 158743
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980
|| ||||||||||| || | ||||| |||||
Sbjct 158744 ATCCAAAAAGAATCCACCCTTCATCTCGTCCT 158775
Score = 98.7 bits (108), Expect = 1e-15
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
||||| | || || ||||| || |||||||| | |||||| | || ||||| | |
Sbjct 159020 ATGCAGATCTTCGTCAAAACTTTGACTGGAAAGACCATCACCTTAGAGGTAGAACCCAGT 159079
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
||||| |||||| | ||||| ||||| ||||| ||||| || || || || ||
Sbjct 159080 GACACGATCGAGAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATTCCCCCAGACCAG 159139
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| | || || | | ||||||||| | ||||||| | | | | |||||||||
Sbjct 159140 CAGCGTCTTATCTTTGCTGGCAAACAATTGGAAGATGGACGTACCCTTTCAGACTATAAC 159199
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980
||||| |||||||| || | ||||| |||||
Sbjct 159200 ATTCAGAAAGAATCCACCCTTCATCTCGTCCT 159231
>seq1326
Length=48828
Score = 89.7 bits (98), Expect = 5e-13
Identities = 181/264 (69%), Gaps = 6/264 (2%)
Strand=Plus/Minus
Query 148613 AGTGA-CATTCAGGCCGATGCCGCCTCCGTGTTTAGATATCATGGCACAATCGTTGAGTG 148671
||||| |||| || |||||||| || || |||||| |||| || || | || || |
Sbjct 32855 AGTGAACATTGAGTCCGATGCCACCAGCGCTTTTAGAAATCAATGCGCACTGCTTAAGAG 32796
Query 148672 TTTTATAGATGCCGTTAATACTGTCCTCTTGAATGTTAAGCAGGTAGCACGATGACATTT 148731
| | ||| || || | ||| ||||| || || || |||| ||| |||| || || | ||
Sbjct 32795 TATCATAAATTCCTTCAATGCTGTCTTCCTGCATTGTAAGAAGGAAGCAAGAGGAAAGTT 32736
Query 148732 GAGGCATTTTCATGCCAGACGAAAATAGAGTTGGACTAGCGTGAGTGAACAGCTTTGCCC 148791
|||| || | || ||| || ||||| | | |||||||||||| | | || |
Sbjct 32735 GAGGTCTTGTAGTGGCAGCATTGAAAAGAGTCGAGAT-GCGTGAGTGAAC--CATCGCTC 32679
Query 148792 G--CATCAATCTATAGGATTCGATAGCGCTTTCGATGTCATCACCATGAATCTGTAGAGC 148849
||| || | || | ||| ||||| || ||||||||| |||||||| | ||
Sbjct 32678 AGACATTAAATTGTAAGTTTCAATAGCCGCATCAATGTCATCATCATGAATCCCAATTGC 32619
Query 148850 TACACGCATCAGCATGTGTTGAGG 148873
|| | ||| ||||||||||| ||
Sbjct 32618 AACTCTCATTAGCATGTGTTGTGG 32595
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478606145201440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |