Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02] 9,402 sequences; 286,766,519 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq30 147 6e-30 >seq30 Length=458414 Score = 147 bits (162), Expect = 6e-30 Identities = 274/401 (68%), Gaps = 6/401 (1%) Strand=Plus/Minus Query 111315 TTTCCACTTCTCACAACAAAGCGAACATATTGGAAGGGAATTGTCGAAGAACTTCTGTGG 111374 |||||| | || || || || || | |||||| |||||||| || || ||||||||| Sbjct 345552 TTTCCATTGCTGACCACCAAACGTGTTTTTTGGAAAGGAATTGTGGAGGAGCTTCTGTGG 345493 Query 111375 TTTATTCGCGGAAGTACAAATGCAAATGAACTTGCAGCAAAAAATGTAAAAATTTGGGAT 111434 ||| | ||| |||||||||||||||| || ||| ||| || | ||||||||| Sbjct 345492 TTTGTGAAGGGATGTACAAATGCAAATGAGCTGAAAGCTAAAGGAGTTCACATTTGGGAT 345433 Query 111435 GGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTCGACAACGAAGAAGGTGAT 111494 ||||| || | || || || || | | || | || || |||||||| Sbjct 345432 GGAAACTCTTCCAGGGAATTCCTGGACAAAATGGGATTCACTGATCGGGAGGAAGGTGAC 345373 Query 111495 CTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAACCATGCAC 111554 || ||||| || || || ||||||||||| |||||||| ||||| || || || ||| | Sbjct 345372 CTGGGACCTGTGTATGGCTTTCAATGGCGTCACTTTGGAGCAGAGTATAAGACTATGAAA 345313 Query 111555 GACTCATATGATTCACAGGGAACTGATCAATTACAGAATGTCATTGATCAAATTAAGAAC 111614 || ||||| ||| ||| |||||| |||||| | || ||||| || || || Sbjct 345312 GATAACTATGAGGGACAAGGAGTTGATCAGTTACAGCAAGTAATTGACATGATCAAAAAT 345253 Query 111615 AACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACC---CAAATGCATTGGAAAAA 111671 | || ||| || || ||||| |||| ||| ||||| | || || | | || Sbjct 345252 GATCCGTATTCCCGACGGATTATCATGACTGCGTGGAATCCTTCAGATCTACT---CCAA 345196 Query 111672 ATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGT 111712 |||||| | ||||| ||||| | | |||||||||||| Sbjct 345195 ATGGCATTACCACCGTGTCACTGTCTAGCCCAGTTTTATGT 345155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303196593952364