Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02] 9,402 sequences; 286,766,519 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq47 95.1 1e-14 seq159 86.0 5e-12 >seq47 Length=390960 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| ||||||||||| || || || || || ||||| || |||| ||| |||| Sbjct 276933 ATGCAGATTTTTGTCAAGACTCTTACTGGCAAGACCATCACTCTCGAGGTGGAACCCAGT 276874 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||||| ||| | | || || || || ||||| ||||| |||| || ||| Sbjct 276873 GACACCATTGAAAATGTGAAGGCCAAGATCCAGGATAAGGAAGGGATCCCACCAGACCAG 276814 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || | ||||||| ||| || ||||| || || |||| | ||| | | ||||| ||| Sbjct 276813 CAGCGTCTTATTTTTGCTGGTAAACAGTTGGAGGATGGCCGTACCCTTTCTGATTACAAC 276754 Query 115466 ATTCAAAAAGAGTCTAC 115482 |||||||| |||||||| Sbjct 276753 ATTCAAAAGGAGTCTAC 276737 Score = 87.8 bits (96), Expect = 2e-12 Identities = 139/198 (70%), Gaps = 1/198 (1%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| ||||||||||| || || || || || ||||| || |||| ||| |||| Sbjct 276478 ATGCAGATTTTTGTCAAGACTCTTACTGGCAAGACCATCACTCTCGAGGTGGAACCCAGT 276419 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||||| ||| | | || || || || ||||| ||||| |||| || ||| Sbjct 276418 GACACCATTGAAAATGTGAAGGCCAAGATCCAGGATAAGGAAGGGATCCCACCAGACCAG 276359 Query 115406 CAAAGACTTATTTATGC-GGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 || | ||||||| ||| || ||||| || || |||| | ||| | | ||||| || Sbjct 276358 CAGCGTCTTATTTTTGCTGGTAAAACAGTTGGAGGATGGCCGTACCCTTTCTGATTACAA 276299 Query 115465 CATTCAAAAAGAGTCTAC 115482 ||||||||| |||||||| Sbjct 276298 CATTCAAAAGGAGTCTAC 276281 >seq159 Length=219009 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| || |||||||| || || || ||||| ||||| || | ||| |||| || Sbjct 158015 ATGCAGATCTTTGTCAAGACCCTTACAGGAAAGACCATCACATTGGAAGTGGAGCCCTCT 158074 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||||| | | | | || || || ||| ||||| ||||| ||||| |||||| Sbjct 158075 GACACCATCGAAAATGTTAAGGCTAAGATTCAAGATAAGGAAGGTATCCCCCCAGATCAG 158134 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || | || || | ||| || || || || ||||| | | ||| || | || |||||| Sbjct 158135 CAGCGTCTCATCTTTGCTGGAAAGCAGTTGGAAGACGGCCGAACATTGTCAGACTATAAC 158194 Query 115466 ATTCAAAAAGAGTCTAC 115482 ||||||||||| || || Sbjct 158195 ATTCAAAAAGAATCCAC 158211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425295261160240