Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02] 9,402 sequences; 286,766,519 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq263 104 2e-17 seq463 100 3e-16 seq159 100 3e-16 seq47 100 3e-16 >seq263 Length=158529 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 131023 AGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCC 131082 ||||| | ||| | || |||||||||||||||||||| || || | ||| | || Sbjct 64840 AGCACAAGATGCAACGTTGACTCCTTTTGAATGTTGTAGTCACTAAGGGTCCTACCATCT 64899 Query 131083 TCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCG 131142 || ||||| || || || |||| |||||||| ||||| || |||||||| || ||||| Sbjct 64900 TCGAGCTGTTTACCGGCAAAGATCAAACGCTGTTGGTCTGGGGGGATTCCCTCCTTGTCT 64959 Query 131143 GTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTT 131202 ||| || ||||| | || | |||||| ||| || | || | ||| | ||| Sbjct 64960 TGGATCTTGGCCTTGACATTTTCGATAGTATCACTGGGTTCAACCTCAAGGGTGATAGTT 65019 Query 131203 TTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || || || | ||||| || || |||||||| Sbjct 65020 TTCCCAGTCAATGTTTTCACAAAGATCTGCAT 65051 >seq463 Length=112955 Score = 100 bits (110), Expect = 3e-16 Identities = 136/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||||||||||||||||||| | || | ||||| || || || || || ||| Sbjct 58491 CCTTTTGAATGTTGTAATCGGAGAGTGTCCTTCCATCCTCGAGTTGTTTTCCGGCAAAGA 58432 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | || |||||||| ||||| |||||||| || ||||| ||| || ||||| | || Sbjct 58431 TCAACCGCTGCTGATCCGGGGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCT 58372 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | || || ||| || | || | || | ||||||||| || || ||||| |||| Sbjct 58371 CGATCGTGTCACTGGGTTCCACCTCAAGCGTGATGGTTTTACCCGTGAGGGTTTTAACGA 58312 Query 131225 AAATCTGCAT 131234 |||||||||| Sbjct 58311 AAATCTGCAT 58302 >seq159 Length=219009 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| | | ||| || || | ||| | || ||||||||||| |||||||| ||||| Sbjct 157786 CCACCTCTGAGACGGAGGACGAGATGAAGAGTGGACTCCTTTTGGATGTTGTAGTCGCTG 157727 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||||| || ||||| || || |||| |||||||||||||| || || Sbjct 157726 AGGGTACGGCCATCCTCAAGTTGCTTTCCAGCAAAGATCAAACGCTGCTGGTCTGGGGGA 157667 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||| || ||||| | || | || || | | ||| | Sbjct 157666 ATGCCTTCCTTGTCTTGGATCTTAGCCTTGACATTTTCAATGGTGTCAGAAGGCTCCACC 157607 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | ||| | || || || || | ||| || || || ||||||||| Sbjct 157606 TCAAGGGTGATCGTCTTTCCAGTCAAAGTCTTGACAAAGATCTGCATG 157559 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/229 (70%), Gaps = 1/229 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| | | ||| || || | ||| | || ||||||||||| |||||||| ||||| Sbjct 159475 CCACCTCTGAGACGGAGGACGAGATGAAGAGTGGACTCCTTTTGGATGTTGTAGTCGCTG 159416 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||||| || ||||| || || |||| |||||||||||||| || || Sbjct 159415 AGGGTTCGGCCATCCTCAAGTTGCTTTCCAGCAAAGATCAAACGCTGCTGGTCTGGGGGA 159356 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||| || ||||| | || | || || | | ||| | Sbjct 159355 ATGCCTTCCTTGTCTTGGATCTTAGCCTTGACATTTTCAATGGTGTCAGAAGGCTCCACC 159296 Query 131188 TCGACGGT-AACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | ||| | || ||| || || | ||| || || || ||||||||| Sbjct 159295 TCAAGGGTGATCGTCTTTTCCAGTCAAAGTCTTGACAAAGATCTGCATG 159247 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | ||| | ||| |||||||| || || ||||| ||||| Sbjct 159703 CCACCTCGAAGACGGAGGACGAGATGAAGGGTGGACTCCTTCTGGATATTGTAGTCGCTG 159644 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||||| || ||||| || || |||| |||||||| ||||| || ||| Sbjct 159643 AGGGTACGGCCATCCTCAAGTTGCTTTCCAGCAAAGATCAAACGCTGTTGGTCTGGGGGG 159584 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 |||||||| ||||| || || ||| | | || | ||| || | || || | Sbjct 159583 ATTCCTTCCTTGTCTTGAATCTTGGCCTTAACGTTTTCGATAGTGTCAGAGGGTTCCACC 159524 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | || || || || || || || ||||| |||||||| Sbjct 159523 TCCAATGTGATAGTCTTTCCTGTAAGCGTCTTAACGAAGATCTGCAT 159477 Score = 89.7 bits (98), Expect = 5e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | ||| || || | ||| | ||| || || || |||||||| || || Sbjct 159247 GCCACCTCGGAGACGGAGGACGAGATGAAGGGTGGATTCTTTCTGAATGTTATAGTCTGA 159188 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||| || || || | || ||||| || |||| | |||||||||||| || || Sbjct 159187 AAGGGTACGTCCATCTTCCAATTGTTTGCCAGCAAAGATAAGACGCTGCTGGTCTGGGGG 159128 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || ||||| ||||| ||| || ||||| | ||| | || || ||| || | Sbjct 159127 AATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATTCTCGATCGTGTCACTGGGTTCTAC 159068 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | ||| | ||| || || || | |||||| ||||| ||||||||| Sbjct 159067 CTCTAAGGTGATGGTCTTTCCAGTCAAAGTTTTGACGAAGATCTGCATG 159019 Score = 86.0 bits (94), Expect = 6e-12 Identities = 159/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | ||| || || | ||| | || || |||||||| || ||||| ||||| Sbjct 157559 GCCACCTCGGAGACGGAGGACGAGATGGAGTGTAGATTCCTTTTGGATATTGTAGTCGCT 157500 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | |||||| || || | |||||| || || |||| | ||| || || || || || Sbjct 157499 GAGGGTGCGACCATCTTCCAACTGCTTTCCAGCAAAGATGAGACGTTGTTGATCTGGGGG 157440 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGC-TTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185 || ||||| || || ||| | | ||| || | | || | ||| || | | ||| | Sbjct 157439 AATGCCTTCCTTATCT-TGAATCTTTGCCTTCACATTTTCGATAGTGTCAGAAGGCTCCA 157381 Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGA 131236 || | ||| | || || || || || || || |||||||||||||||| Sbjct 157380 CCTCAAGGGTGATCGTCTTGCCAGTGAGTGTCTTCACGAAAATCTGCATGA 157330 >seq47 Length=390960 Score = 100 bits (110), Expect = 3e-16 Identities = 160/227 (70%), Gaps = 2/227 (1%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | ||| | ||| ||||||||||||||||||||||| Sbjct 276480 CCACCTCGGAGACGAAGGACAAGATGAAGGGTAGACTCCTTTTGAATGTTGTAATCAGAA 276539 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| | |||||| || || | || | |||||||||||| || ||| Sbjct 276540 AGGGTGCGACCATCCTCCAACTGCTTTCCAGCAAAAATAAGACGCTGCTGGTCTGGTGGG 276599 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||| || || || ||| || ||||| | || | || || ||| || | Sbjct 276600 ATTCCCTCCTTATCTTGGATCTTAGCCTTGACATTTTCAATGGTGTCACTGGGTTCCACC 276659 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | ||| || || || ||||| || || ||||| ||||| Sbjct 276660 TCGAGAGTGATGGTCTTGCCAGTAAGAGTCTTGAC-AAAAT-TGCAT 276704 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/228 (69%), Gaps = 1/228 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | ||| | ||| ||||||||||||||||||||||| Sbjct 276251 CCACCTCGGAGACGAAGGACAAGATGAAGGGTAGACTCCTTTTGAATGTTGTAATCAGAA 276310 Query 131068 ATGGTGCGCGAGTCCTCTAGCTG-CTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||| || ||||| | ||| || || || | || | |||||||||||| || || Sbjct 276311 AGGGTACGGCCATCCTCCAACTGTTTTACCAGCAAAAATAAGACGCTGCTGGTCTGGTGG 276370 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| ||||| || || ||| || ||| | | || | || || ||| || | Sbjct 276371 GATCCCTTCCTTATCCTGGATCTTGGCCTTCACATTTTCAATGGTGTCACTGGGTTCCAC 276430 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | ||| || || || ||||| || || ||||||||||| Sbjct 276431 CTCGAGAGTGATGGTCTTGCCAGTAAGAGTCTTGACAAAAATCTGCAT 276478 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 131019 ACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGA 131078 ||| || || | ||| | ||| ||||||||||||||||||||||| | ||| || Sbjct 276718 ACGAAGGACAAGATGAAGGGTAGACTCCTTTTGAATGTTGTAATCAGAAAGGGTACGGCC 276777 Query 131079 GTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTT 131138 ||||| | ||| || || || | || | |||||||||||| || ||||| ||||| || Sbjct 276778 ATCCTCCAACTGTTTACCAGCAAAAATAAGACGCTGCTGGTCTGGTGGGATCCCTTCCTT 276837 Query 131139 GTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAAC 131198 || ||| || ||| | | || | || || ||| || | |||| || | Sbjct 276838 ATCCTGGATCTTGGCCTTCACATTTTCAATGGTGTCACTGGGTTCCACCTCGAGAGTGAT 276897 Query 131199 GGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 ||| || || || ||||| || || ||||||||||| Sbjct 276898 GGTCTTGCCAGTAAGAGTCTTGACAAAAATCTGCAT 276933 Score = 93.3 bits (102), Expect = 4e-14 Identities = 164/235 (70%), Gaps = 3/235 (1%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | ||| | ||| ||||||||||||||||||||||| Sbjct 277630 CCACCTCGGAGACGAAGGACAAGATGAAGGGTAGACTCCTTTTGAATGTTGTAATCAGAA 277689 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || || || | ||| || | || |||| | |||||||||||| || ||| Sbjct 277690 AGCGTACGGCCATC-TCCAACTGTTTTCA-GCAAAGATAAGACGCTGCTGGTCTGGTGGG 277747 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| || || ||| || ||| | | || | ||| |||| | ||| | Sbjct 277748 ATCCCTTCCTTATCCTGGATCTTGGCCTTCACATTTTCAATAGTGTCGGAAGGCTCCACC 277807 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACTTATT 131242 |||| || | ||| || || || || || || |||||||| ||||||| ||||| Sbjct 277808 TCGAGAGTGATGGTCTTGCCAGTGAGTGTCTTCACGAAAATTTGCATGA-TTATT 277861 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/229 (69%), Gaps = 3/229 (1%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | ||| | ||| ||||||||||||||||||||||| Sbjct 277401 CCACCTCGGAGACGAAGGACAAGATGAAGGGTAGACTCCTTTTGAATGTTGTAATCAGAA 277460 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTG--GTCCGGAG 131125 | ||| || ||||| | ||| || || || |||| | ||||||| | ||| || Sbjct 277461 AGGGTACGGCCATCCTCCAACTGTTTTCCAGCAAAGATAAGACGCTGCCGGCGTCTGG-T 277519 Query 131126 GGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185 |||| ||||| || || ||| || ||| | | || | ||| || | | ||| | Sbjct 277520 GGATCCCTTCCTTATCCTGGATCTTGGCCTTCACATTTTCAATAGTGTCTGAAGGCTCCA 277579 Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | ||| || || || ||||| || || ||||||||||| Sbjct 277580 CCTCGAGAGTGATGGTCTTGCCAGTAAGAGTCTTGACAAAAATCTGCAT 277628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471957326695680