Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02]
9,402 sequences; 286,766,519 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq263 104 2e-17
seq463 100 3e-16
seq159 100 3e-16
seq47 100 3e-16
>seq263
Length=158529
Score = 104 bits (114), Expect = 2e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 131023 AGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCC 131082
||||| | ||| | || |||||||||||||||||||| || || | ||| | ||
Sbjct 64840 AGCACAAGATGCAACGTTGACTCCTTTTGAATGTTGTAGTCACTAAGGGTCCTACCATCT 64899
Query 131083 TCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCG 131142
|| ||||| || || || |||| |||||||| ||||| || |||||||| || |||||
Sbjct 64900 TCGAGCTGTTTACCGGCAAAGATCAAACGCTGTTGGTCTGGGGGGATTCCCTCCTTGTCT 64959
Query 131143 GTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTT 131202
||| || ||||| | || | |||||| ||| || | || | ||| | |||
Sbjct 64960 TGGATCTTGGCCTTGACATTTTCGATAGTATCACTGGGTTCAACCTCAAGGGTGATAGTT 65019
Query 131203 TTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| || || | ||||| || || ||||||||
Sbjct 65020 TTCCCAGTCAATGTTTTCACAAAGATCTGCAT 65051
>seq463
Length=112955
Score = 100 bits (110), Expect = 3e-16
Identities = 136/190 (72%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104
|||||||||||||||||||| | || | ||||| || || || || || |||
Sbjct 58491 CCTTTTGAATGTTGTAATCGGAGAGTGTCCTTCCATCCTCGAGTTGTTTTCCGGCAAAGA 58432
Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164
| || |||||||| ||||| |||||||| || ||||| ||| || ||||| | ||
Sbjct 58431 TCAACCGCTGCTGATCCGGGGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCT 58372
Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224
| | || || ||| || | || | || | ||||||||| || || ||||| ||||
Sbjct 58371 CGATCGTGTCACTGGGTTCCACCTCAAGCGTGATGGTTTTACCCGTGAGGGTTTTAACGA 58312
Query 131225 AAATCTGCAT 131234
||||||||||
Sbjct 58311 AAATCTGCAT 58302
>seq159
Length=219009
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| | | ||| || || | ||| | || ||||||||||| |||||||| |||||
Sbjct 157786 CCACCTCTGAGACGGAGGACGAGATGAAGAGTGGACTCCTTTTGGATGTTGTAGTCGCTG 157727
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||| || ||||| || ||||| || || |||| |||||||||||||| || ||
Sbjct 157726 AGGGTACGGCCATCCTCAAGTTGCTTTCCAGCAAAGATCAAACGCTGCTGGTCTGGGGGA 157667
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| ||||| ||||| ||| || ||||| | || | || || | | ||| |
Sbjct 157666 ATGCCTTCCTTGTCTTGGATCTTAGCCTTGACATTTTCAATGGTGTCAGAAGGCTCCACC 157607
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235
|| | ||| | || || || || | ||| || || || |||||||||
Sbjct 157606 TCAAGGGTGATCGTCTTTCCAGTCAAAGTCTTGACAAAGATCTGCATG 157559
Score = 98.7 bits (108), Expect = 9e-16
Identities = 160/229 (70%), Gaps = 1/229 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| | | ||| || || | ||| | || ||||||||||| |||||||| |||||
Sbjct 159475 CCACCTCTGAGACGGAGGACGAGATGAAGAGTGGACTCCTTTTGGATGTTGTAGTCGCTG 159416
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||| || ||||| || ||||| || || |||| |||||||||||||| || ||
Sbjct 159415 AGGGTTCGGCCATCCTCAAGTTGCTTTCCAGCAAAGATCAAACGCTGCTGGTCTGGGGGA 159356
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| ||||| ||||| ||| || ||||| | || | || || | | ||| |
Sbjct 159355 ATGCCTTCCTTGTCTTGGATCTTAGCCTTGACATTTTCAATGGTGTCAGAAGGCTCCACC 159296
Query 131188 TCGACGGT-AACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235
|| | ||| | || ||| || || | ||| || || || |||||||||
Sbjct 159295 TCAAGGGTGATCGTCTTTTCCAGTCAAAGTCTTGACAAAGATCTGCATG 159247
Score = 98.7 bits (108), Expect = 9e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| || || | ||| | ||| |||||||| || || ||||| |||||
Sbjct 159703 CCACCTCGAAGACGGAGGACGAGATGAAGGGTGGACTCCTTCTGGATATTGTAGTCGCTG 159644
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||| || ||||| || ||||| || || |||| |||||||| ||||| || |||
Sbjct 159643 AGGGTACGGCCATCCTCAAGTTGCTTTCCAGCAAAGATCAAACGCTGTTGGTCTGGGGGG 159584
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|||||||| ||||| || || ||| | | || | ||| || | || || |
Sbjct 159583 ATTCCTTCCTTGTCTTGAATCTTGGCCTTAACGTTTTCGATAGTGTCAGAGGGTTCCACC 159524
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | || || || || || || || ||||| ||||||||
Sbjct 159523 TCCAATGTGATAGTCTTTCCTGTAAGCGTCTTAACGAAGATCTGCAT 159477
Score = 89.7 bits (98), Expect = 5e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
|||||| || | ||| || || | ||| | ||| || || || |||||||| || ||
Sbjct 159247 GCCACCTCGGAGACGGAGGACGAGATGAAGGGTGGATTCTTTCTGAATGTTATAGTCTGA 159188
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| ||| || || || | || ||||| || |||| | |||||||||||| || ||
Sbjct 159187 AAGGGTACGTCCATCTTCCAATTGTTTGCCAGCAAAGATAAGACGCTGCTGGTCTGGGGG 159128
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
|| ||||| ||||| ||| || ||||| | ||| | || || ||| || |
Sbjct 159127 AATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATTCTCGATCGTGTCACTGGGTTCTAC 159068
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235
|| | ||| | ||| || || || | |||||| ||||| |||||||||
Sbjct 159067 CTCTAAGGTGATGGTCTTTCCAGTCAAAGTTTTGACGAAGATCTGCATG 159019
Score = 86.0 bits (94), Expect = 6e-12
Identities = 159/231 (69%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
|||||| || | ||| || || | ||| | || || |||||||| || ||||| |||||
Sbjct 157559 GCCACCTCGGAGACGGAGGACGAGATGGAGTGTAGATTCCTTTTGGATATTGTAGTCGCT 157500
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| |||||| || || | |||||| || || |||| | ||| || || || || ||
Sbjct 157499 GAGGGTGCGACCATCTTCCAACTGCTTTCCAGCAAAGATGAGACGTTGTTGATCTGGGGG 157440
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGC-TTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185
|| ||||| || || ||| | | ||| || | | || | ||| || | | ||| |
Sbjct 157439 AATGCCTTCCTTATCT-TGAATCTTTGCCTTCACATTTTCGATAGTGTCAGAAGGCTCCA 157381
Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGA 131236
|| | ||| | || || || || || || || ||||||||||||||||
Sbjct 157380 CCTCAAGGGTGATCGTCTTGCCAGTGAGTGTCTTCACGAAAATCTGCATGA 157330
>seq47
Length=390960
Score = 100 bits (110), Expect = 3e-16
Identities = 160/227 (70%), Gaps = 2/227 (1%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| || || | ||| | ||| |||||||||||||||||||||||
Sbjct 276480 CCACCTCGGAGACGAAGGACAAGATGAAGGGTAGACTCCTTTTGAATGTTGTAATCAGAA 276539
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| ||||| | |||||| || || | || | |||||||||||| || |||
Sbjct 276540 AGGGTGCGACCATCCTCCAACTGCTTTCCAGCAAAAATAAGACGCTGCTGGTCTGGTGGG 276599
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
||||| || || || ||| || ||||| | || | || || ||| || |
Sbjct 276600 ATTCCCTCCTTATCTTGGATCTTAGCCTTGACATTTTCAATGGTGTCACTGGGTTCCACC 276659
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| || | ||| || || || ||||| || || ||||| |||||
Sbjct 276660 TCGAGAGTGATGGTCTTGCCAGTAAGAGTCTTGAC-AAAAT-TGCAT 276704
Score = 93.3 bits (102), Expect = 4e-14
Identities = 158/228 (69%), Gaps = 1/228 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| || || | ||| | ||| |||||||||||||||||||||||
Sbjct 276251 CCACCTCGGAGACGAAGGACAAGATGAAGGGTAGACTCCTTTTGAATGTTGTAATCAGAA 276310
Query 131068 ATGGTGCGCGAGTCCTCTAGCTG-CTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| ||| || ||||| | ||| || || || | || | |||||||||||| || ||
Sbjct 276311 AGGGTACGGCCATCCTCCAACTGTTTTACCAGCAAAAATAAGACGCTGCTGGTCTGGTGG 276370
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
||| ||||| || || ||| || ||| | | || | || || ||| || |
Sbjct 276371 GATCCCTTCCTTATCCTGGATCTTGGCCTTCACATTTTCAATGGTGTCACTGGGTTCCAC 276430
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| || | ||| || || || ||||| || || |||||||||||
Sbjct 276431 CTCGAGAGTGATGGTCTTGCCAGTAAGAGTCTTGACAAAAATCTGCAT 276478
Score = 93.3 bits (102), Expect = 4e-14
Identities = 150/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 131019 ACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGA 131078
||| || || | ||| | ||| ||||||||||||||||||||||| | ||| ||
Sbjct 276718 ACGAAGGACAAGATGAAGGGTAGACTCCTTTTGAATGTTGTAATCAGAAAGGGTACGGCC 276777
Query 131079 GTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTT 131138
||||| | ||| || || || | || | |||||||||||| || ||||| ||||| ||
Sbjct 276778 ATCCTCCAACTGTTTACCAGCAAAAATAAGACGCTGCTGGTCTGGTGGGATCCCTTCCTT 276837
Query 131139 GTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAAC 131198
|| ||| || ||| | | || | || || ||| || | |||| || |
Sbjct 276838 ATCCTGGATCTTGGCCTTCACATTTTCAATGGTGTCACTGGGTTCCACCTCGAGAGTGAT 276897
Query 131199 GGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
||| || || || ||||| || || |||||||||||
Sbjct 276898 GGTCTTGCCAGTAAGAGTCTTGACAAAAATCTGCAT 276933
Score = 93.3 bits (102), Expect = 4e-14
Identities = 164/235 (70%), Gaps = 3/235 (1%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| || || | ||| | ||| |||||||||||||||||||||||
Sbjct 277630 CCACCTCGGAGACGAAGGACAAGATGAAGGGTAGACTCCTTTTGAATGTTGTAATCAGAA 277689
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || || || | ||| || | || |||| | |||||||||||| || |||
Sbjct 277690 AGCGTACGGCCATC-TCCAACTGTTTTCA-GCAAAGATAAGACGCTGCTGGTCTGGTGGG 277747
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| ||||| || || ||| || ||| | | || | ||| |||| | ||| |
Sbjct 277748 ATCCCTTCCTTATCCTGGATCTTGGCCTTCACATTTTCAATAGTGTCGGAAGGCTCCACC 277807
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACTTATT 131242
|||| || | ||| || || || || || || |||||||| ||||||| |||||
Sbjct 277808 TCGAGAGTGATGGTCTTGCCAGTGAGTGTCTTCACGAAAATTTGCATGA-TTATT 277861
Score = 87.8 bits (96), Expect = 2e-12
Identities = 158/229 (69%), Gaps = 3/229 (1%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| || || | ||| | ||| |||||||||||||||||||||||
Sbjct 277401 CCACCTCGGAGACGAAGGACAAGATGAAGGGTAGACTCCTTTTGAATGTTGTAATCAGAA 277460
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTG--GTCCGGAG 131125
| ||| || ||||| | ||| || || || |||| | ||||||| | ||| ||
Sbjct 277461 AGGGTACGGCCATCCTCCAACTGTTTTCCAGCAAAGATAAGACGCTGCCGGCGTCTGG-T 277519
Query 131126 GGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185
|||| ||||| || || ||| || ||| | | || | ||| || | | ||| |
Sbjct 277520 GGATCCCTTCCTTATCCTGGATCTTGGCCTTCACATTTTCAATAGTGTCTGAAGGCTCCA 277579
Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| || | ||| || || || ||||| || || |||||||||||
Sbjct 277580 CCTCGAGAGTGATGGTCTTGCCAGTAAGAGTCTTGACAAAAATCTGCAT 277628
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 471957326695680
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