Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02] 9,402 sequences; 286,766,519 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq1672 98.7 1e-15 >seq1672 Length=38749 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 93116 TCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTG 93175 || || || || || | ||| || || || || | ||||| | ||||| || |||||| Sbjct 32594 TCATCACGAGAGATAAGCTCGTTACTAAAGGTCAGGCCTGGCATAAGTCCACGCTTCTTG 32535 Query 93176 AGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCC 93235 ||||| || || || ||||| || ||||| |||||||| ||||| || |||||||| || Sbjct 32534 AGCCAGAAGATGGATGCAAAGCTTCCAGAGAAAAATATCCCTTCAACTGCTGCAAAAGCA 32475 Query 93236 ACAATACGTTCGGCAAAATTTGCGGAATTA-CTGCTGATCCATTTTAAAGCCCAATCGGC 93294 | | | ||| |||||| | | | ||| | || ||||| | |||||| || || Sbjct 32474 ATCACCCTTTCAGCAAAAGTAGAGTTCTTATCAGC-AATCCAGGACAGAGCCCAGTCAGC 32416 Query 93295 TTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAGGTAATC 93342 || ||||||| || || | ||||| | || || || ||||| || Sbjct 32415 CTTCTTCTTAACGCATGGCATGGTTTCAACGGCATTGAAAAGGTAGTC 32368 Score = 84.2 bits (92), Expect = 2e-11 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 93581 TTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCC 93640 ||||||||||| |||||||| ||||||||||| || || || || || |||||||| | | Sbjct 31924 TTTGAAAGATCCACTTCTTCCACAGTCCAAAAGGAAGCCTCGGCCTTCTTGTACATTTGC 31865 Query 93641 CATATGTCTTGATATTGAATTGGAAA 93666 || || || ||||| ||||| || || Sbjct 31864 CAGATATCATGATACTGAATGGGGAA 31839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556795354934480