Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02]
9,402 sequences; 286,766,519 total letters
Query= NC_008520.2
Length=132239
Score E
Sequences producing significant alignments: (Bits) Value
seq159 84.2 2e-11
>seq159
Length=219009
Score = 84.2 bits (92), Expect = 2e-11
Identities = 156/229 (68%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246
||||| || || |||||||| |||| || || ||||| ||| | || ||||||||
Sbjct 159020 ATGCAGATCTTCGTCAAAACTTTGACTGGAAAGACCATCACCTTAGAGGTAGAACCCAGT 159079
Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306
|| | | | | || || || || ||||| |||||| ||||| || ||
Sbjct 159080 GACACGATCGAGAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATTCCCCCAGACCAG 159139
Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366
|| | ||||| | ||| |||||||||||||||||| || | | || |||||
Sbjct 159140 CAGCGTCTTATCTTTGCTGGCAAACAATTGGAAGATGGACGTACCCTTTCAGACTATAAC 159199
Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111415
|| || |||||||| || || ||| | || | ||||| || |||||||
Sbjct 159200 ATTCAGAAAGAATCCACCCTTCATCTCGTCCTCCGTCTCCGAGGTGGCA 159248
Score = 82.4 bits (90), Expect = 6e-11
Identities = 184/272 (68%), Gaps = 6/272 (2%)
Strand=Plus/Plus
Query 111148 GTTTTAACTAAT-ACCTTGGTCATTTA---TAAGAGTTTAAAAATGCAAATTTTTGTCAA 111203
||||||| |||| ||||| | |||| | ||| ||| | ||||| ||||| || ||
Sbjct 157291 GTTTTAA-TAATGACCTTAATTTTTTAATTTCAGA-TTTCATCATGCAGATTTTCGTGAA 157348
Query 111204 AACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGCGATTCTGTTGGCCAGGT 111263
|| | || ||||| || || ||| | || ||| || || || | | | ||
Sbjct 157349 GACACTCACTGGCAAGACGATCACCCTTGAGGTGGAGCCTTCTGACACTATCGAAAATGT 157408
Query 111264 AAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAACAAAGGCTTATTTATGC 111323
|| ||| ||| || || |||||| ||||| ||||||||| | || || | |||
Sbjct 157409 GAAGGCAAAGATTCAAGATAAGGAAGGCATTCCCCCAGATCAACAACGTCTCATCTTTGC 157468
Query 111324 GGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAATATACAAAAAGAATCTAC 111383
|| || || ||||||||| | || | ||| || ||||| ||||| ||||||||
Sbjct 157469 TGGAAAGCAGTTGGAAGATGGTCGCACCCTCAGCGACTACAATATCCAAAAGGAATCTAC 157528
Query 111384 ACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111415
||| ||| | || | ||||| || |||||||
Sbjct 157529 ACTCCATCTCGTCCTCCGTCTCCGAGGTGGCA 157560
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422991525168400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |