Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02] 9,402 sequences; 286,766,519 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq159 84.2 2e-11 >seq159 Length=219009 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246 ||||| || || |||||||| |||| || || ||||| ||| | || |||||||| Sbjct 159020 ATGCAGATCTTCGTCAAAACTTTGACTGGAAAGACCATCACCTTAGAGGTAGAACCCAGT 159079 Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306 || | | | | || || || || ||||| |||||| ||||| || || Sbjct 159080 GACACGATCGAGAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATTCCCCCAGACCAG 159139 Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366 || | ||||| | ||| |||||||||||||||||| || | | || ||||| Sbjct 159140 CAGCGTCTTATCTTTGCTGGCAAACAATTGGAAGATGGACGTACCCTTTCAGACTATAAC 159199 Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111415 || || |||||||| || || ||| | || | ||||| || ||||||| Sbjct 159200 ATTCAGAAAGAATCCACCCTTCATCTCGTCCTCCGTCTCCGAGGTGGCA 159248 Score = 82.4 bits (90), Expect = 6e-11 Identities = 184/272 (68%), Gaps = 6/272 (2%) Strand=Plus/Plus Query 111148 GTTTTAACTAAT-ACCTTGGTCATTTA---TAAGAGTTTAAAAATGCAAATTTTTGTCAA 111203 ||||||| |||| ||||| | |||| | ||| ||| | ||||| ||||| || || Sbjct 157291 GTTTTAA-TAATGACCTTAATTTTTTAATTTCAGA-TTTCATCATGCAGATTTTCGTGAA 157348 Query 111204 AACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGCGATTCTGTTGGCCAGGT 111263 || | || ||||| || || ||| | || ||| || || || | | | || Sbjct 157349 GACACTCACTGGCAAGACGATCACCCTTGAGGTGGAGCCTTCTGACACTATCGAAAATGT 157408 Query 111264 AAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAACAAAGGCTTATTTATGC 111323 || ||| ||| || || |||||| ||||| ||||||||| | || || | ||| Sbjct 157409 GAAGGCAAAGATTCAAGATAAGGAAGGCATTCCCCCAGATCAACAACGTCTCATCTTTGC 157468 Query 111324 GGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAATATACAAAAAGAATCTAC 111383 || || || ||||||||| | || | ||| || ||||| ||||| |||||||| Sbjct 157469 TGGAAAGCAGTTGGAAGATGGTCGCACCCTCAGCGACTACAATATCCAAAAGGAATCTAC 157528 Query 111384 ACTACATTTAGTGTTGCGTCTGCGCGGTGGCA 111415 ||| ||| | || | ||||| || ||||||| Sbjct 157529 ACTCCATCTCGTCCTCCGTCTCCGAGGTGGCA 157560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422991525168400