Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02]
9,402 sequences; 286,766,519 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq159 167 4e-36
seq463 143 5e-29
seq263 114 2e-20
seq20 95.1 2e-14
seq733 84.2 4e-11
>seq159
Length=219009
Score = 167 bits (184), Expect = 4e-36
Identities = 173/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || ||||| || | || | || || ||||| |||||||| |||||||| || ||
Sbjct 158241 CCACCACGAAGACGAAGGACGAGATGAAGGGTGGATTCTTTTTGAATGTTATAGTCTGAC 158182
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
| ||| | || ||||| |||||||| || || || ||||| | || || || || ||
Sbjct 158181 AATGTTCGGCCGTCTTCCAACTGCTTTCCAGCAAAGATGAGACGCTGCTGATCTGGGGGG 158122
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| |||||||| ||||||||||| ||||| || ||||||||||| | | || |||
Sbjct 158121 ATACCTTCCTTATCTTGAATCTTAGCCTTAACATTTTCGATGGTGTCAGAGGGCTCCACT 158062
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||| |||||||| ||||| || ||||||||||| || ||||||||
Sbjct 158061 TCCAATGTGATGGTCTTTCCTGTAAGGGTCTTGACAAAGATCTGCAT 158015
Score = 163 bits (180), Expect = 5e-35
Identities = 175/229 (76%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 68234 TCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGA 68293
|||||| ||||| || | || | || || || || || || || || || ||||| ||
Sbjct 159932 TCCTCCACGAAGACGAAGGACAAGATGCAGAGTCGATTCCTTCTGAATATTGTAATCAGA 159873
Query 68294 GAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGG 68353
||| || | ||||| || ||||| || || || || || || | |||||||| || ||
Sbjct 159872 GAGAGTACGTCCATCCTCCAACTGTTTACCAGCAAAAATAAGACGCTGTTGGTCTGGGGG 159813
Query 68354 AATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGA-TTCTA 68412
||| |||||||| ||||| ||||| |||||||| |||||| ||||| |||| |||||
Sbjct 159812 AATACCTTCCTTATCTTGGATCTTGGCCTTGACATTCTCGATCGTGTC-GCTGGGTTCTA 159754
Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
| ||||| |||||||| ||||| || | ||||||||||| ||||||||
Sbjct 159753 CCTCCAAAGTGATGGTCTTTCCAGTCAAAGTCTTGACGAAGATCTGCAT 159705
Score = 159 bits (176), Expect = 6e-34
Identities = 157/203 (77%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 68259 TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGC 68318
|| || ||||| ||||| || |||||||| || || || || | |||||||| || ||
Sbjct 159222 TGAAGGGTGGATTCTTTCTGAATGTTATAGTCTGAAAGGGTACGTCCATCTTCCAATTGT 159163
Query 68319 TTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTT 68378
|| || || || || || | || ||||| || |||||||||||||||||||| |||||
Sbjct 159162 TTGCCAGCAAAGATAAGACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCTTGGATCTTG 159103
Query 68379 GCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTG 68438
|||||||| |||||| ||||| | |||||| || ||||||||||| ||||| ||
Sbjct 159102 GCCTTGACATTCTCGATCGTGTCACTGGGTTCTACCTCTAAGGTGATGGTCTTTCCAGTC 159043
Query 68439 AGGGTCTTGACGAATATCTGCAT 68461
| || |||||||| ||||||||
Sbjct 159042 AAAGTTTTGACGAAGATCTGCAT 159020
Score = 158 bits (174), Expect = 2e-33
Identities = 159/207 (77%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 68259 TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGC 68318
|| || || || || |||||||| || || ||| ||| || | |||||||| ||||||
Sbjct 157534 TGGAGTGTAGATTCCTTTTGGATATTGTAGTCGCTGAGGGTGCGACCATCTTCCAACTGC 157475
Query 68319 TTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTT 68378
|| || || || ||||| | |||||| || || |||||||||||||| ||||||||||||
Sbjct 157474 TTTCCAGCAAAGATGAGACGTTGTTGATCTGGGGGAATGCCTTCCTTATCTTGAATCTTT 157415
Query 68379 GCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTG 68438
||||| || ||||| ||||| | | || || || | |||||| || || || |||
Sbjct 157414 GCCTTCACATTTTCGATAGTGTCAGAAGGCTCCACCTCAAGGGTGATCGTCTTGCCAGTG 157355
Query 68439 AGGGTCTTGACGAATATCTGCATTATG 68465
|| ||||| ||||| |||||||| |||
Sbjct 157354 AGTGTCTTCACGAAAATCTGCATGATG 157328
Score = 152 bits (168), Expect = 9e-32
Identities = 171/229 (75%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292
|||| ||||| || || | || | || || ||||| ||||||||||| || || |||
Sbjct 158792 TTCCACCGCGGAGACGGAGGACGAGATGAAGGGTGGATTCTTTTTGGATATTGTAGTCGC 158733
Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352
||| || | ||||| || | ||||| || || || ||||| | || || || || |
Sbjct 158732 TGAGGGTACGACCATCCTCAAGTTGCTTTCCAGCAAAGATGAGACGCTGCTGATCTGGGG 158673
Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412
|||| |||||||| ||||| |||||||||||||| |||||| ||||| | ||| |
Sbjct 158672 GAATACCTTCCTTATCTTGGATCTTTGCCTTGACATTCTCGATCGTGTCACTGGGTTCCA 158613
Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
| || || |||||||| ||||| || | ||||||||||| ||||||||
Sbjct 158612 CCTCTAAAGTGATGGTCTTTCCAGTCAACGTCTTGACGAAGATCTGCAT 158564
Score = 152 bits (168), Expect = 9e-32
Identities = 156/204 (76%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 68259 TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGC 68318
|| || || || || |||||||| || || ||| ||| || | |||||||| ||||||
Sbjct 158994 TGGAGTGTAGATTCCTTTTGGATATTGTAGTCGCTGAGGGTGCGACCATCTTCCAACTGC 158935
Query 68319 TTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTT 68378
|| || || || ||||| | ||||| || || |||||||||||||| |||||||||||
Sbjct 158934 TTTCCAGCAAAGATGAGACGCTGTTGATCTGGGGGAATGCCTTCCTTATCTTGAATCTTG 158875
Query 68379 GCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTG 68438
||||| || ||||||||||| | | || || || | ||||||||||| || ||
Sbjct 158874 GCCTTAACATTTTCGATGGTGTCGGAAGGCTCCACCTCAAGAGTGATGGTTTTGCCAGTA 158815
Query 68439 AGGGTCTTGACGAATATCTGCATT 68462
||||||||||| || || ||||||
Sbjct 158814 AGGGTCTTGACAAAAATTTGCATT 158791
Score = 143 bits (158), Expect = 5e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || ||||| || | || | || || |||||||| || ||||| || || ||| |
Sbjct 159703 CCACCTCGAAGACGGAGGACGAGATGAAGGGTGGACTCCTTCTGGATATTGTAGTCGCTG 159644
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | ||||| || || || || | | |||||||| || ||
Sbjct 159643 AGGGTACGGCCATCCTCAAGTTGCTTTCCAGCAAAGATCAAACGCTGTTGGTCTGGGGGG 159584
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| |||||||||||||||||||| ||||| ||| ||||| ||||| | | ||| ||
Sbjct 159583 ATTCCTTCCTTGTCTTGAATCTTGGCCTTAACGTTTTCGATAGTGTCAGAGGGTTCCACC 159524
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||| ||||| || ||||| || || ||||| ||||| ||||||||
Sbjct 159523 TCCAATGTGATAGTCTTTCCTGTAAGCGTCTTAACGAAGATCTGCAT 159477
Score = 136 bits (150), Expect = 7e-27
Identities = 152/203 (75%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 68259 TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGC 68318
|| || |||||||| ||||||||||| || ||| ||| || | ||||| || | |||
Sbjct 157762 TGAAGAGTGGACTCCTTTTGGATGTTGTAGTCGCTGAGGGTACGGCCATCCTCAAGTTGC 157703
Query 68319 TTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTT 68378
|| || || || || | | || ||||| || |||||||||||||||||||| |||||
Sbjct 157702 TTTCCAGCAAAGATCAAACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCTTGGATCTTA 157643
Query 68379 GCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTG 68438
|||||||| || |||||||| | | || || || | |||||| || ||||| ||
Sbjct 157642 GCCTTGACATTTTCAATGGTGTCAGAAGGCTCCACCTCAAGGGTGATCGTCTTTCCAGTC 157583
Query 68439 AGGGTCTTGACGAATATCTGCAT 68461
| |||||||| || ||||||||
Sbjct 157582 AAAGTCTTGACAAAGATCTGCAT 157560
Score = 134 bits (148), Expect = 3e-26
Identities = 153/204 (75%), Gaps = 1/204 (0%)
Strand=Plus/Minus
Query 68259 TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGC 68318
|| || |||||||| ||||||||||| || ||| ||| || | ||||| || | |||
Sbjct 159451 TGAAGAGTGGACTCCTTTTGGATGTTGTAGTCGCTGAGGGTTCGGCCATCCTCAAGTTGC 159392
Query 68319 TTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTT 68378
|| || || || || | | || ||||| || |||||||||||||||||||| |||||
Sbjct 159391 TTTCCAGCAAAGATCAAACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCTTGGATCTTA 159332
Query 68379 GCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT-TTTTCCCGT 68437
|||||||| || |||||||| | | || || || | |||||| || |||||| ||
Sbjct 159331 GCCTTGACATTTTCAATGGTGTCAGAAGGCTCCACCTCAAGGGTGATCGTCTTTTCCAGT 159272
Query 68438 GAGGGTCTTGACGAATATCTGCAT 68461
| |||||||| || ||||||||
Sbjct 159271 CAAAGTCTTGACAAAGATCTGCAT 159248
Score = 132 bits (146), Expect = 9e-26
Identities = 152/203 (75%), Gaps = 1/203 (0%)
Strand=Plus/Minus
Query 68259 TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGC 68318
|| || |||||||| || |||||||| || ||| ||| || | ||||| || | |||
Sbjct 157989 TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTGAGGGTACGGCCATCCTCAAGTTGC 157930
Query 68319 TTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTT 68378
|| || || || || | | ||||| || || ||||| |||||||| |||||||||||
Sbjct 157929 TTTCCAGCAAAGATCAAACGCTGTTG-TCTGGGGGAATTCCTTCCTTATCTTGAATCTTG 157871
Query 68379 GCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTG 68438
||||| ||| ||||| ||||| | | ||| || ||||| ||||| || ||||| ||
Sbjct 157870 GCCTTAACGTTTTCGATAGTGTCAGAGGGTTCCACCTCCAATGTGATAGTCTTTCCTGTA 157811
Query 68439 AGGGTCTTGACGAATATCTGCAT 68461
|| ||||| || || ||||||||
Sbjct 157810 AGCGTCTTAACAAAGATCTGCAT 157788
Score = 109 bits (120), Expect = 1e-18
Identities = 117/155 (75%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 68259 TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGC 68318
|| || |||||||| || ||||| || || || || ||||| | || ||||| || ||
Sbjct 158538 TGAAGGGTGGACTCCTTCTGGATATTGTAGTCCGACAGTGTTCGGCCGTCTTCCAATTGT 158479
Query 68319 TTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTT 68378
|| || || || ||||| | || || || || ||||| ||||||||||||||||| |||
Sbjct 158478 TTACCAGCAAAGATGAGACGCTGCTGATCTGGGGGAATACCTTCCTTGTCTTGAATTTTT 158419
Query 68379 GCCTTGACGGCCTCGATGGTGTCTGCTGATTCTAC 68413
|||||||| ||||| ||||| | || ||| ||
Sbjct 158418 GCCTTGACATTTTCGATCGTGTCAGATGGTTCAAC 158384
>seq463
Length=112955
Score = 143 bits (158), Expect = 5e-29
Identities = 145/189 (77%), Gaps = 0/189 (0%)
Strand=Plus/Minus
Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333
||||| ||||| ||||||||||||||||| ||||| || | || || ||||| || ||
Sbjct 58489 TTTTGAATGTTGTAATCGGAGAGTGTCCTTCCATCCTCGAGTTGTTTTCCGGCAAAGATC 58430
Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393
| | || || || || || || || |||||||| || ||||| |||||||| ||||
Sbjct 58429 AACCGCTGCTGATCCGGGGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCG 58370
Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAAT 68453
|| ||||| | ||| || || | ||||||||||| ||||||||||| || |||||
Sbjct 58369 ATCGTGTCACTGGGTTCCACCTCAAGCGTGATGGTTTTACCCGTGAGGGTTTTAACGAAA 58310
Query 68454 ATCTGCATT 68462
|||||||||
Sbjct 58309 ATCTGCATT 58301
>seq263
Length=158529
Score = 114 bits (126), Expect = 2e-20
Identities = 151/208 (73%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 68255 CAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313
|||| || | ||| ||||| ||||| ||||| || || || ||||| |||||||| |
Sbjct 64844 CAAGATGCAACGTTGACTCCTTTTGAATGTTGTAGTCACTAAGGGTCCTACCATCTTCGA 64903
Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373
||| || ||||| || || | | |||||||| || || || || ||||||||||| |
Sbjct 64904 GCTGTTTACCGGCAAAGATCAAACGCTGTTGGTCTGGGGGGATTCCCTCCTTGTCTTGGA 64963
Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433
|||| |||||||| ||||| || || | ||| || || | |||||| ||||| |
Sbjct 64964 TCTTGGCCTTGACATTTTCGATAGTATCACTGGGTTCAACCTCAAGGGTGATAGTTTTCC 65023
Query 68434 CCGTGAGGGTCTTGACGAATATCTGCAT 68461
| || | || || || || ||||||||
Sbjct 65024 CAGTCAATGTTTTCACAAAGATCTGCAT 65051
>seq20
Length=551401
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515
||||||||||||||||||| |||||| ||||| ||||||| ||||||||||||||||
Sbjct 543542 GCCCGGTTAGCTCAGTCGGTAGAGCGTTAGGCTTTTAACCTAACGGTCGTGGGTTCGAGC 543483
Query 84516 CCCACATCGGGC 84527
|||||| |||||
Sbjct 543482 CCCACACCGGGC 543471
>seq733
Length=78500
Score = 84.2 bits (92), Expect = 4e-11
Identities = 64/73 (88%), Gaps = 2/73 (3%)
Strand=Plus/Plus
Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGT-GGTCGTGGGTTCGAG 84514
|||||||||||||||||| |||||| ||||| ||||||| |||||||||||||||
Sbjct 12892 GCCCGGTTAGCTCAGTCGT-AGAGCGTTAGGCTTTTAACCTAAACGGTCGTGGGTTCGAG 12950
Query 84515 CCCCACATCGGGC 84527
|||||||||||||
Sbjct 12951 CCCCACATCGGGC 12963
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921514086327440
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