Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02] 9,402 sequences; 286,766,519 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq159 167 4e-36 seq463 143 5e-29 seq263 114 2e-20 seq20 95.1 2e-14 seq733 84.2 4e-11 >seq159 Length=219009 Score = 167 bits (184), Expect = 4e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | || | || || ||||| |||||||| |||||||| || || Sbjct 158241 CCACCACGAAGACGAAGGACGAGATGAAGGGTGGATTCTTTTTGAATGTTATAGTCTGAC 158182 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | ||| | || ||||| |||||||| || || || ||||| | || || || || || Sbjct 158181 AATGTTCGGCCGTCTTCCAACTGCTTTCCAGCAAAGATGAGACGCTGCTGATCTGGGGGG 158122 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || |||||||| ||||||||||| ||||| || ||||||||||| | | || ||| Sbjct 158121 ATACCTTCCTTATCTTGAATCTTAGCCTTAACATTTTCGATGGTGTCAGAGGGCTCCACT 158062 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| |||||||| ||||| || ||||||||||| || |||||||| Sbjct 158061 TCCAATGTGATGGTCTTTCCTGTAAGGGTCTTGACAAAGATCTGCAT 158015 Score = 163 bits (180), Expect = 5e-35 Identities = 175/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 68234 TCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGA 68293 |||||| ||||| || | || | || || || || || || || || || ||||| || Sbjct 159932 TCCTCCACGAAGACGAAGGACAAGATGCAGAGTCGATTCCTTCTGAATATTGTAATCAGA 159873 Query 68294 GAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGG 68353 ||| || | ||||| || ||||| || || || || || || | |||||||| || || Sbjct 159872 GAGAGTACGTCCATCCTCCAACTGTTTACCAGCAAAAATAAGACGCTGTTGGTCTGGGGG 159813 Query 68354 AATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGA-TTCTA 68412 ||| |||||||| ||||| ||||| |||||||| |||||| ||||| |||| ||||| Sbjct 159812 AATACCTTCCTTATCTTGGATCTTGGCCTTGACATTCTCGATCGTGTC-GCTGGGTTCTA 159754 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | ||||| |||||||| ||||| || | ||||||||||| |||||||| Sbjct 159753 CCTCCAAAGTGATGGTCTTTCCAGTCAAAGTCTTGACGAAGATCTGCAT 159705 Score = 159 bits (176), Expect = 6e-34 Identities = 157/203 (77%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 68259 TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGC 68318 || || ||||| ||||| || |||||||| || || || || | |||||||| || || Sbjct 159222 TGAAGGGTGGATTCTTTCTGAATGTTATAGTCTGAAAGGGTACGTCCATCTTCCAATTGT 159163 Query 68319 TTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTT 68378 || || || || || || | || ||||| || |||||||||||||||||||| ||||| Sbjct 159162 TTGCCAGCAAAGATAAGACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCTTGGATCTTG 159103 Query 68379 GCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTG 68438 |||||||| |||||| ||||| | |||||| || ||||||||||| ||||| || Sbjct 159102 GCCTTGACATTCTCGATCGTGTCACTGGGTTCTACCTCTAAGGTGATGGTCTTTCCAGTC 159043 Query 68439 AGGGTCTTGACGAATATCTGCAT 68461 | || |||||||| |||||||| Sbjct 159042 AAAGTTTTGACGAAGATCTGCAT 159020 Score = 158 bits (174), Expect = 2e-33 Identities = 159/207 (77%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 68259 TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGC 68318 || || || || || |||||||| || || ||| ||| || | |||||||| |||||| Sbjct 157534 TGGAGTGTAGATTCCTTTTGGATATTGTAGTCGCTGAGGGTGCGACCATCTTCCAACTGC 157475 Query 68319 TTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTT 68378 || || || || ||||| | |||||| || || |||||||||||||| |||||||||||| Sbjct 157474 TTTCCAGCAAAGATGAGACGTTGTTGATCTGGGGGAATGCCTTCCTTATCTTGAATCTTT 157415 Query 68379 GCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTG 68438 ||||| || ||||| ||||| | | || || || | |||||| || || || ||| Sbjct 157414 GCCTTCACATTTTCGATAGTGTCAGAAGGCTCCACCTCAAGGGTGATCGTCTTGCCAGTG 157355 Query 68439 AGGGTCTTGACGAATATCTGCATTATG 68465 || ||||| ||||| |||||||| ||| Sbjct 157354 AGTGTCTTCACGAAAATCTGCATGATG 157328 Score = 152 bits (168), Expect = 9e-32 Identities = 171/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 |||| ||||| || || | || | || || ||||| ||||||||||| || || ||| Sbjct 158792 TTCCACCGCGGAGACGGAGGACGAGATGAAGGGTGGATTCTTTTTGGATATTGTAGTCGC 158733 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 ||| || | ||||| || | ||||| || || || ||||| | || || || || | Sbjct 158732 TGAGGGTACGACCATCCTCAAGTTGCTTTCCAGCAAAGATGAGACGCTGCTGATCTGGGG 158673 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 |||| |||||||| ||||| |||||||||||||| |||||| ||||| | ||| | Sbjct 158672 GAATACCTTCCTTATCTTGGATCTTTGCCTTGACATTCTCGATCGTGTCACTGGGTTCCA 158613 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | || || |||||||| ||||| || | ||||||||||| |||||||| Sbjct 158612 CCTCTAAAGTGATGGTCTTTCCAGTCAACGTCTTGACGAAGATCTGCAT 158564 Score = 152 bits (168), Expect = 9e-32 Identities = 156/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 68259 TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGC 68318 || || || || || |||||||| || || ||| ||| || | |||||||| |||||| Sbjct 158994 TGGAGTGTAGATTCCTTTTGGATATTGTAGTCGCTGAGGGTGCGACCATCTTCCAACTGC 158935 Query 68319 TTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTT 68378 || || || || ||||| | ||||| || || |||||||||||||| ||||||||||| Sbjct 158934 TTTCCAGCAAAGATGAGACGCTGTTGATCTGGGGGAATGCCTTCCTTATCTTGAATCTTG 158875 Query 68379 GCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTG 68438 ||||| || ||||||||||| | | || || || | ||||||||||| || || Sbjct 158874 GCCTTAACATTTTCGATGGTGTCGGAAGGCTCCACCTCAAGAGTGATGGTTTTGCCAGTA 158815 Query 68439 AGGGTCTTGACGAATATCTGCATT 68462 ||||||||||| || || |||||| Sbjct 158814 AGGGTCTTGACAAAAATTTGCATT 158791 Score = 143 bits (158), Expect = 5e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | || | || || |||||||| || ||||| || || ||| | Sbjct 159703 CCACCTCGAAGACGGAGGACGAGATGAAGGGTGGACTCCTTCTGGATATTGTAGTCGCTG 159644 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | ||||| || || || || | | |||||||| || || Sbjct 159643 AGGGTACGGCCATCCTCAAGTTGCTTTCCAGCAAAGATCAAACGCTGTTGGTCTGGGGGG 159584 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || |||||||||||||||||||| ||||| ||| ||||| ||||| | | ||| || Sbjct 159583 ATTCCTTCCTTGTCTTGAATCTTGGCCTTAACGTTTTCGATAGTGTCAGAGGGTTCCACC 159524 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| ||||| || ||||| || || ||||| ||||| |||||||| Sbjct 159523 TCCAATGTGATAGTCTTTCCTGTAAGCGTCTTAACGAAGATCTGCAT 159477 Score = 136 bits (150), Expect = 7e-27 Identities = 152/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 68259 TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGC 68318 || || |||||||| ||||||||||| || ||| ||| || | ||||| || | ||| Sbjct 157762 TGAAGAGTGGACTCCTTTTGGATGTTGTAGTCGCTGAGGGTACGGCCATCCTCAAGTTGC 157703 Query 68319 TTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTT 68378 || || || || || | | || ||||| || |||||||||||||||||||| ||||| Sbjct 157702 TTTCCAGCAAAGATCAAACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCTTGGATCTTA 157643 Query 68379 GCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTG 68438 |||||||| || |||||||| | | || || || | |||||| || ||||| || Sbjct 157642 GCCTTGACATTTTCAATGGTGTCAGAAGGCTCCACCTCAAGGGTGATCGTCTTTCCAGTC 157583 Query 68439 AGGGTCTTGACGAATATCTGCAT 68461 | |||||||| || |||||||| Sbjct 157582 AAAGTCTTGACAAAGATCTGCAT 157560 Score = 134 bits (148), Expect = 3e-26 Identities = 153/204 (75%), Gaps = 1/204 (0%) Strand=Plus/Minus Query 68259 TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGC 68318 || || |||||||| ||||||||||| || ||| ||| || | ||||| || | ||| Sbjct 159451 TGAAGAGTGGACTCCTTTTGGATGTTGTAGTCGCTGAGGGTTCGGCCATCCTCAAGTTGC 159392 Query 68319 TTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTT 68378 || || || || || | | || ||||| || |||||||||||||||||||| ||||| Sbjct 159391 TTTCCAGCAAAGATCAAACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCTTGGATCTTA 159332 Query 68379 GCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT-TTTTCCCGT 68437 |||||||| || |||||||| | | || || || | |||||| || |||||| || Sbjct 159331 GCCTTGACATTTTCAATGGTGTCAGAAGGCTCCACCTCAAGGGTGATCGTCTTTTCCAGT 159272 Query 68438 GAGGGTCTTGACGAATATCTGCAT 68461 | |||||||| || |||||||| Sbjct 159271 CAAAGTCTTGACAAAGATCTGCAT 159248 Score = 132 bits (146), Expect = 9e-26 Identities = 152/203 (75%), Gaps = 1/203 (0%) Strand=Plus/Minus Query 68259 TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGC 68318 || || |||||||| || |||||||| || ||| ||| || | ||||| || | ||| Sbjct 157989 TGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTGAGGGTACGGCCATCCTCAAGTTGC 157930 Query 68319 TTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTT 68378 || || || || || | | ||||| || || ||||| |||||||| ||||||||||| Sbjct 157929 TTTCCAGCAAAGATCAAACGCTGTTG-TCTGGGGGAATTCCTTCCTTATCTTGAATCTTG 157871 Query 68379 GCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTG 68438 ||||| ||| ||||| ||||| | | ||| || ||||| ||||| || ||||| || Sbjct 157870 GCCTTAACGTTTTCGATAGTGTCAGAGGGTTCCACCTCCAATGTGATAGTCTTTCCTGTA 157811 Query 68439 AGGGTCTTGACGAATATCTGCAT 68461 || ||||| || || |||||||| Sbjct 157810 AGCGTCTTAACAAAGATCTGCAT 157788 Score = 109 bits (120), Expect = 1e-18 Identities = 117/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 68259 TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGC 68318 || || |||||||| || ||||| || || || || ||||| | || ||||| || || Sbjct 158538 TGAAGGGTGGACTCCTTCTGGATATTGTAGTCCGACAGTGTTCGGCCGTCTTCCAATTGT 158479 Query 68319 TTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTT 68378 || || || || ||||| | || || || || ||||| ||||||||||||||||| ||| Sbjct 158478 TTACCAGCAAAGATGAGACGCTGCTGATCTGGGGGAATACCTTCCTTGTCTTGAATTTTT 158419 Query 68379 GCCTTGACGGCCTCGATGGTGTCTGCTGATTCTAC 68413 |||||||| ||||| ||||| | || ||| || Sbjct 158418 GCCTTGACATTTTCGATCGTGTCAGATGGTTCAAC 158384 >seq463 Length=112955 Score = 143 bits (158), Expect = 5e-29 Identities = 145/189 (77%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 ||||| ||||| ||||||||||||||||| ||||| || | || || ||||| || || Sbjct 58489 TTTTGAATGTTGTAATCGGAGAGTGTCCTTCCATCCTCGAGTTGTTTTCCGGCAAAGATC 58430 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 | | || || || || || || || |||||||| || ||||| |||||||| |||| Sbjct 58429 AACCGCTGCTGATCCGGGGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCG 58370 Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAAT 68453 || ||||| | ||| || || | ||||||||||| ||||||||||| || ||||| Sbjct 58369 ATCGTGTCACTGGGTTCCACCTCAAGCGTGATGGTTTTACCCGTGAGGGTTTTAACGAAA 58310 Query 68454 ATCTGCATT 68462 ||||||||| Sbjct 58309 ATCTGCATT 58301 >seq263 Length=158529 Score = 114 bits (126), Expect = 2e-20 Identities = 151/208 (73%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 68255 CAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313 |||| || | ||| ||||| ||||| ||||| || || || ||||| |||||||| | Sbjct 64844 CAAGATGCAACGTTGACTCCTTTTGAATGTTGTAGTCACTAAGGGTCCTACCATCTTCGA 64903 Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373 ||| || ||||| || || | | |||||||| || || || || ||||||||||| | Sbjct 64904 GCTGTTTACCGGCAAAGATCAAACGCTGTTGGTCTGGGGGGATTCCCTCCTTGTCTTGGA 64963 Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433 |||| |||||||| ||||| || || | ||| || || | |||||| ||||| | Sbjct 64964 TCTTGGCCTTGACATTTTCGATAGTATCACTGGGTTCAACCTCAAGGGTGATAGTTTTCC 65023 Query 68434 CCGTGAGGGTCTTGACGAATATCTGCAT 68461 | || | || || || || |||||||| Sbjct 65024 CAGTCAATGTTTTCACAAAGATCTGCAT 65051 >seq20 Length=551401 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 ||||||||||||||||||| |||||| ||||| ||||||| |||||||||||||||| Sbjct 543542 GCCCGGTTAGCTCAGTCGGTAGAGCGTTAGGCTTTTAACCTAACGGTCGTGGGTTCGAGC 543483 Query 84516 CCCACATCGGGC 84527 |||||| ||||| Sbjct 543482 CCCACACCGGGC 543471 >seq733 Length=78500 Score = 84.2 bits (92), Expect = 4e-11 Identities = 64/73 (88%), Gaps = 2/73 (3%) Strand=Plus/Plus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGT-GGTCGTGGGTTCGAG 84514 |||||||||||||||||| |||||| ||||| ||||||| ||||||||||||||| Sbjct 12892 GCCCGGTTAGCTCAGTCGT-AGAGCGTTAGGCTTTTAACCTAAACGGTCGTGGGTTCGAG 12950 Query 84515 CCCCACATCGGGC 84527 ||||||||||||| Sbjct 12951 CCCCACATCGGGC 12963 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921514086327440