Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02] 9,402 sequences; 286,766,519 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq159 122 9e-23 seq263 105 7e-18 seq47 102 8e-17 seq463 91.5 1e-13 >seq159 Length=219009 Score = 122 bits (134), Expect = 9e-23 Identities = 144/195 (74%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||||||||| |||||||||||||| | ||||| ||||| ||||| || || | | Sbjct 157753 GACTCCTTTTGGATGTTGTAGTCGCTGAGGGTACGGCCATCCTCAAGTTGCTTTCCAGCA 157694 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| | |||||| ||||| || || || ||||| ||||| ||| || || | Sbjct 157693 AAGATCAAACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCTTGGATCTTAGCCTTGACA 157634 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | ||| | |||||| | | ||||||||| | || | ||| || ||||||| ||| || Sbjct 157633 TTTTCAATGGTGTCAGAAGGCTCCACCTCAAGGGTGATCGTCTTTCCAGTCAAAGTCTTG 157574 Query 138601 ACAAAAATCTGCATG 138615 ||||| ||||||||| Sbjct 157573 ACAAAGATCTGCATG 157559 Score = 116 bits (128), Expect = 4e-21 Identities = 144/196 (73%), Gaps = 1/196 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||||||||| |||||||||||||| | || || ||||| ||||| || || | | Sbjct 159442 GACTCCTTTTGGATGTTGTAGTCGCTGAGGGTTCGGCCATCCTCAAGTTGCTTTCCAGCA 159383 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| | |||||| ||||| || || || ||||| ||||| ||| || || | Sbjct 159382 AAGATCAAACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCTTGGATCTTAGCCTTGACA 159323 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGT-TTTACCAGTCAGAGTTTT 138599 | ||| | |||||| | | ||||||||| | || | ||| ||| ||||||| ||| || Sbjct 159322 TTTTCAATGGTGTCAGAAGGCTCCACCTCAAGGGTGATCGTCTTTTCCAGTCAAAGTCTT 159263 Query 138600 TACAAAAATCTGCATG 138615 ||||| ||||||||| Sbjct 159262 GACAAAGATCTGCATG 159247 Score = 100 bits (110), Expect = 3e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| ||||| | ||| | || | ||| | | || |||||||| || ||||||||||| Sbjct 159019 GCCACCTCGGAGACGGAGGACGAGATGGAGTGTAGATTCCTTTTGGATATTGTAGTCGCT 158960 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || || || || | || || || | | |||| ||||||||||| || || || Sbjct 158959 GAGGGTGCGACCATCTTCCAACTGCTTTCCAGCAAAGATGAGACGCTGTTGATCTGGGGG 158900 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTCCA 138565 || ||||| || || ||| | || | |||| | ||| | |||||||| | ||||| Sbjct 158899 AATGCCTTCCTTATC-TTGAATCTTGGCCTTAACATTTTCGATGGTGTCGGAAGGCTCCA 158841 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| | || | ||||| ||||| || || || |||||||| ||||| Sbjct 158840 CCTCAAGAGTGATGGTTTTGCCAGTAAGGGTCTTGACAAAAATTTGCAT 158792 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || ||||| | ||| | || | ||| | | | |||||||| || || ||||||||||| Sbjct 159703 CCACCTCGAAGACGGAGGACGAGATGAAGGGTGGACTCCTTCTGGATATTGTAGTCGCTG 159644 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| ||||| ||||| || || | | |||| | |||||||||||| || || Sbjct 159643 AGGGTACGGCCATCCTCAAGTTGCTTTCCAGCAAAGATCAAACGCTGTTGGTCTGGGGGG 159584 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||| ||||| ||| | || | |||| | ||| | ||||| | | ||||| Sbjct 159583 ATTCCTTCCTTGTC-TTGAATCTTGGCCTTAACGTTTTCGATAGTGTCAGAGGGTTCCAC 159525 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | || | || || || || || || || || || |||||||| Sbjct 159524 CTCCAATGTGATAGTCTTTCCTGTAAGCGTCTTAACGAAGATCTGCAT 159477 Score = 89.7 bits (98), Expect = 5e-13 Identities = 159/228 (70%), Gaps = 3/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| | ||| | || | ||| | | | |||||||| || |||||||||||||| Sbjct 158013 CCACCTCTGAGACGGAGGACGAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTG 157954 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| ||||| ||||| || || | | |||| | |||||||| ||| || || Sbjct 157953 AGGGTACGGCCATCCTCAAGTTGCTTTCCAGCAAAGATCAAACGCTGTT-GTCTGGGGGA 157895 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||| || || ||| | || | |||| | ||| | ||||| | | ||||| Sbjct 157894 ATTCCTTCCTTATC-TTGAATCTTGGCCTTAACGTTTTCGATAGTGTCAGAGGGTTCCAC 157836 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | || | || || || || || || || ||||| |||||||| Sbjct 157835 CTCCAATGTGATAGTCTTTCCTGTAAGCGTCTTAACAAAGATCTGCAT 157788 Score = 87.8 bits (96), Expect = 2e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| ||||| | ||| | || | ||| | | || |||||||| || ||||||||||| Sbjct 157559 GCCACCTCGGAGACGGAGGACGAGATGGAGTGTAGATTCCTTTTGGATATTGTAGTCGCT 157500 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || || || || | || || || | | |||| ||||| ||||| || || || Sbjct 157499 GAGGGTGCGACCATCTTCCAACTGCTTTCCAGCAAAGATGAGACGTTGTTGATCTGGGGG 157440 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT-TGTTCCACGGTGTCGGTCGACTCCA 138565 || ||||| || || ||| | |||| || | | ||| | ||||| | | ||||| Sbjct 157439 AATGCCTTCCTTATCT-TGAATCTTTGCCTTCACATTTTCGATAGTGTCAGAAGGCTCCA 157381 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 |||| | || | ||| || ||||| || || || || |||||||||||| Sbjct 157380 CCTCAAGGGTGATCGTCTTGCCAGTGAGTGTCTTCACGAAAATCTGCATG 157331 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | || | ||| | | | || || ||||| || ||||||||||| Sbjct 158790 CCACCGCGGAGACGGAGGACGAGATGAAGGGTGGATTCTTTTTGGATATTGTAGTCGCTG 158731 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| ||||| ||||| || || | | |||| |||||||| || || || || Sbjct 158730 AGGGTACGACCATCCTCAAGTTGCTTTCCAGCAAAGATGAGACGCTGCTGATCTGGGGGA 158671 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 |||||||| || || ||| ||| || | | || | ||||| | | |||||| Sbjct 158670 ATACCTTCCTTATCTTGGATCTTTGCCTTGACATTCTCGATCGTGTCACTGGGTTCCACC 158611 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || ||||||| || || || || |||||||| Sbjct 158610 TCTAAAGTGATGGTCTTTCCAGTCAACGTCTTGACGAAGATCTGCAT 158564 >seq263 Length=158529 Score = 105 bits (116), Expect = 7e-18 Identities = 141/196 (72%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGG 138478 ||||||||||||||||||||||||| || | || | || ||||| |||||||||| Sbjct 64856 TTGACTCCTTTTGAATGTTGTAGTCACTAAGGGTCCTACCATCTTCGAGCTGTTTACCGG 64915 Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA 138538 | |||| | |||||||||||| || || || || || ||||| ||| || || | Sbjct 64916 CAAAGATCAAACGCTGTTGGTCTGGGGGGATTCCCTCCTTGTCTTGGATCTTGGCCTTGA 64975 Query 138539 ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 | ||| | || || | | || ||||| | || | ||||| ||||||| |||| Sbjct 64976 CATTTTCGATAGTATCACTGGGTTCAACCTCAAGGGTGATAGTTTTCCCAGTCAATGTTT 65035 Query 138599 TTACAAAAATCTGCAT 138614 | ||||| |||||||| Sbjct 65036 TCACAAAGATCTGCAT 65051 >seq47 Length=390960 Score = 102 bits (112), Expect = 8e-17 Identities = 160/228 (70%), Gaps = 1/228 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || ||||| | ||| | || | ||| | | | |||||||||||||||||||| || Sbjct 276251 CCACCTCGGAGACGAAGGACAAGATGAAGGGTAGACTCCTTTTGAATGTTGTAATCAGAA 276310 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTT-ACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | ||||| ||||| | ||||| ||| | | | || |||||||| ||||| || || Sbjct 276311 AGGGTACGGCCATCCTCCAACTGTTTTACCAGCAAAAATAAGACGCTGCTGGTCTGGTGG 276370 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||| || || ||| || || | | ||| | |||||| | | ||||| Sbjct 276371 GATCCCTTCCTTATCCTGGATCTTGGCCTTCACATTTTCAATGGTGTCACTGGGTTCCAC 276430 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||| || | || || ||||| ||||| || |||||||||||||| Sbjct 276431 CTCGAGAGTGATGGTCTTGCCAGTAAGAGTCTTGACAAAAATCTGCAT 276478 Score = 102 bits (112), Expect = 8e-17 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||||||||||||||| || | ||||| ||||| | |||||||| | | Sbjct 276740 GACTCCTTTTGAATGTTGTAATCAGAAAGGGTACGGCCATCCTCCAACTGTTTACCAGCA 276799 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 | || |||||||| ||||| || || || ||||| || || ||| || || | Sbjct 276800 AAAATAAGACGCTGCTGGTCTGGTGGGATCCCTTCCTTATCCTGGATCTTGGCCTTCACA 276859 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | ||| | |||||| | | |||||||||| || | || || ||||| ||||| || Sbjct 276860 TTTTCAATGGTGTCACTGGGTTCCACCTCGAGAGTGATGGTCTTGCCAGTAAGAGTCTTG 276919 Query 138601 ACAAAAATCTGCAT 138614 |||||||||||||| Sbjct 276920 ACAAAAATCTGCAT 276933 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/227 (70%), Gaps = 4/227 (2%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||||||||| | || | |||||||||||||||| ||||| ||| Sbjct 276027 CCACCACGAAGACGCAAAACAAGGTGAAGAGTTGACTCCTTTTGAATATTGTAATCGGAG 276086 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| ||||| | | ||| | || || |||||||| ||||| || || Sbjct 276087 AAGGTACGGCCATCCTCCACTGTTTTTGCAAAA---ATAAGACGCTGCTGGTCTGGTGG- 276142 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||| || || ||| || ||| | | ||| | ||||| | | ||||||| Sbjct 276143 ATCCCTTCCTTATCCTGGATCTTGCCTTTCACATTTTCAATAGTGTCTGAAGGCTCCACC 276202 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| || | || || ||||| ||||| || |||||||||||||| Sbjct 276203 TCGAGAGTGATGGTCTTGCCAGTAAGAGTCTTGACAAAAATCTGCAT 276249 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 3/229 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || ||||| | ||| | || | ||| | | | |||||||||||||||||||| || Sbjct 277401 CCACCTCGGAGACGAAGGACAAGATGAAGGGTAGACTCCTTTTGAATGTTGTAATCAGAA 277460 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGG--TCCGGAG 138505 | ||||| ||||| | ||||| || | | |||| |||||||| || || || | Sbjct 277461 AGGGTACGGCCATCCTCCAACTGTTTTCCAGCAAAGATAAGACGCTGCCGGCGTCTGGTG 277520 Query 138506 GTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565 | || ||||| || || ||| || || | | ||| | ||||| | | ||||| Sbjct 277521 G-ATCCCTTCCTTATCCTGGATCTTGGCCTTCACATTTTCAATAGTGTCTGAAGGCTCCA 277579 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||||| || | || || ||||| ||||| || |||||||||||||| Sbjct 277580 CCTCGAGAGTGATGGTCTTGCCAGTAAGAGTCTTGACAAAAATCTGCAT 277628 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || ||||| | ||| | || | ||| | | | |||||||||||||||||||| || Sbjct 277630 CCACCTCGGAGACGAAGGACAAGATGAAGGGTAGACTCCTTTTGAATGTTGTAATCAGAA 277689 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| || || | ||||| | | || |||| |||||||| ||||| || || Sbjct 277690 AGCGTACGGCCATC-TCCAACTGTTTTCAGCAA-AGATAAGACGCTGCTGGTCTGGTGGG 277747 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||| || || ||| || || | | ||| | ||||||| | ||||||| Sbjct 277748 ATCCCTTCCTTATCCTGGATCTTGGCCTTCACATTTTCAATAGTGTCGGAAGGCTCCACC 277807 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 |||| || | || || ||||| || || || || ||||| |||||| Sbjct 277808 TCGAGAGTGATGGTCTTGCCAGTGAGTGTCTTCACGAAAATTTGCATG 277855 Score = 82.4 bits (90), Expect = 8e-11 Identities = 162/232 (70%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || ||||| | ||| | || | ||| | | | |||||||||||||||||||| || Sbjct 277169 CCACCTCGGAGACGAAGGACAAGATGAAGGGTAGACTCCTTTTGAATGTTGTAATCAGAA 277228 Query 138448 ATAGTACG-CGAGTCCTCGAGT-TGTTTACCGG-AATAGATTAGACGCT-GTTGGTCCGG 138503 | ||||| | ||||| | |||||||| | || | || ||||||| | ||||| || Sbjct 277229 AGGGTACGGCCCATCCTCCAAACTGTTTACCAGCAAAAAATAAGACGCTTGCTGGTCTGG 277288 Query 138504 A-GGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACT 138562 || || ||||| || || ||| || || | | ||| | ||||| | | || Sbjct 277289 GTGGGAT-CCTTCCTTATCCTGGATCTTGGCCTTCACATTTTCAATAGTGTCTGAAGGCT 277347 Query 138563 CCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||||||| || | || || ||||| ||||| || |||||||||||||| Sbjct 277348 CCACCTCGAGAGTGATGGTCTTGCCAGTAAGAGTCTTGACAAAAATCTGCAT 277399 >seq463 Length=112955 Score = 91.5 bits (100), Expect = 1e-13 Identities = 134/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 |||||||||||||||| ||| | || | |||||||||||||| |||| | ||| Sbjct 58491 CCTTTTGAATGTTGTAATCGGAGAGTGTCCTTCCATCCTCGAGTTGTTTTCCGGCAAAGA 58432 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTT 138544 | | ||||| || ||||| || || || || ||||| ||| || || | | | Sbjct 58431 TCAACCGCTGCTGATCCGGGGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCT 58372 Query 138545 CCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAA 138604 | | ||||| | | |||||||| | ||| | |||||||| || || ||||| || | Sbjct 58371 CGATCGTGTCACTGGGTTCCACCTCAAGCGTGATGGTTTTACCCGTGAGGGTTTTAACGA 58312 Query 138605 AAATCTGCAT 138614 |||||||||| Sbjct 58311 AAATCTGCAT 58302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496204076761440