Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02] 9,402 sequences; 286,766,519 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq159 116 3e-21 seq263 113 3e-20 seq47 100 2e-16 seq463 91.5 1e-13 >seq159 Length=219009 Score = 116 bits (128), Expect = 3e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 14948 TGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGC 15007 |||||||||| | | | || | ||||||||| || ||||| || ||||| || || Sbjct 159248 TGCCACCTCGGAGACGGAGGACGAGATGAAGGGTGGATTCTTTCTGAATGTTATAGTCTG 159189 Query 15008 TGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 || | | | ||||| |||||||||||||| | || | |||||| ||||| | Sbjct 159188 AAAGGGTACGTCCATCTTCCAATTGTTTGCCAGCAAAGATAAGACGCTGCTGGTCTGGGG 159129 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 |||| ||||||||||| || ||| || ||| | || || || || || ||||| Sbjct 159128 GAATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATTCTCGATCGTGTCACTGGGTTCTA 159069 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 | |||||||| ||||| || || |||| |||||| || || || ||||| Sbjct 159068 CCTCTAAGGTGATGGTCTTTCCAGTCAAAGTTTTGACGAAGATCTGCAT 159020 Score = 107 bits (118), Expect = 1e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 14948 TGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGC 15007 |||||||||| | | | || | ||| || ||||| || ||||| || ||||| |||| Sbjct 159020 TGCCACCTCGGAGACGGAGGACGAGATGGAGTGTAGATTCCTTTTGGATATTGTAGTCGC 158961 Query 15008 TGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 |||| | | | ||||| || || || ||||| | || | ||||||||| || | Sbjct 158960 TGAGGGTGCGACCATCTTCCAACTGCTTTCCAGCAAAGATGAGACGCTGTTGATCTGGGG 158901 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 |||| |||||||| || ||| ||| || ||| |||| || || ||| | || | Sbjct 158900 GAATGCCTTCCTTATCTTGAATCTTGGCCTTAACATTTTCGATGGTGTCGGAAGGCTCCA 158841 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 | || | || |||||||| || || || || || |||||||||||||| Sbjct 158840 CCTCAAGAGTGATGGTTTTGCCAGTAAGGGTCTTGACAAAAATTTGCAT 158792 Score = 100 bits (110), Expect = 2e-16 Identities = 146/205 (71%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032 ||||||||| || || || || |||||||| |||||||| | | | || || | ||| Sbjct 157990 ATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTGAGGGTACGGCCATCCTCAAGTTG 157931 Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092 || ||||| | ||||||||||||| ||| |||||||||||||| || ||| || Sbjct 157930 CTTTCCAGCAAAGATCAAACGCTGTT-GTCTGGGGGAATTCCTTCCTTATCTTGAATCTT 157872 Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152 | || || |||| ||||| || ||| || || || || || || || ||||| Sbjct 157871 GGCCTTAACGTTTTCGATAGTGTCAGAGGGTTCCACCTCCAATGTGATAGTCTTTCCTGT 157812 Query 15153 CAGAGTTTTTACAAAAATTTGCATA 15177 || || || ||||| || |||||| Sbjct 157811 AAGCGTCTTAACAAAGATCTGCATA 157787 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 |||||||| | | | || | ||||||||| || || || || || ||||| |||||| Sbjct 159703 CCACCTCGAAGACGGAGGACGAGATGAAGGGTGGACTCCTTCTGGATATTGTAGTCGCTG 159644 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | | || || | ||| || ||||| | ||||||||||||||||| || Sbjct 159643 AGGGTACGGCCATCCTCAAGTTGCTTTCCAGCAAAGATCAAACGCTGTTGGTCTGGGGGG 159584 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 |||||||||||||| ||| ||| || || |||| ||||| || ||| || Sbjct 159583 ATTCCTTCCTTGTCTTGAATCTTGGCCTTAACGTTTTCGATAGTGTCAGAGGGTTCCACC 159524 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || || || || || ||||| || || || || || || |||||| Sbjct 159523 TCCAATGTGATAGTCTTTCCTGTAAGCGTCTTAACGAAGATCTGCATA 159476 Score = 96.9 bits (106), Expect = 2e-15 Identities = 145/205 (71%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032 |||||| || || || ||||| |||||||| |||||||| ||| | || || | ||| Sbjct 159452 ATGAAGAGTGGACTCCTTTTGGATGTTGTAGTCGCTGAGGGTTCGGCCATCCTCAAGTTG 159393 Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092 || ||||| | ||||||||||| ||||| ||||| ||||||||||| || || Sbjct 159392 CTTTCCAGCAAAGATCAAACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCTTGGATCTT 159333 Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGT-TTTACCTG 15151 || ||| |||| || || || | || || || | ||| || || ||| || | Sbjct 159332 AGCCTTGACATTTTCAATGGTGTCAGAAGGCTCCACCTCAAGGGTGATCGTCTTTTCCAG 159273 Query 15152 TCAGAGTTTTTACAAAAATTTGCAT 15176 ||| ||| || ||||| || ||||| Sbjct 159272 TCAAAGTCTTGACAAAGATCTGCAT 159248 Score = 93.3 bits (102), Expect = 3e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032 |||||| || || || ||||| |||||||| |||||||| | | | || || | ||| Sbjct 157763 ATGAAGAGTGGACTCCTTTTGGATGTTGTAGTCGCTGAGGGTACGGCCATCCTCAAGTTG 157704 Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092 || ||||| | ||||||||||| ||||| ||||| ||||||||||| || || Sbjct 157703 CTTTCCAGCAAAGATCAAACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCTTGGATCTT 157644 Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152 || ||| |||| || || || | || || || | ||| || || || || || Sbjct 157643 AGCCTTGACATTTTCAATGGTGTCAGAAGGCTCCACCTCAAGGGTGATCGTCTTTCCAGT 157584 Query 15153 CAGAGTTTTTACAAAAATTTGCAT 15176 || ||| || ||||| || ||||| Sbjct 157583 CAAAGTCTTGACAAAGATCTGCAT 157560 Score = 91.5 bits (100), Expect = 1e-13 Identities = 143/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032 ||| || || || || || || || |||||||| |||| | | | || || || || Sbjct 159908 ATGCAGAGTCGATTCCTTCTGAATATTGTAATCAGAGAGAGTACGTCCATCCTCCAACTG 159849 Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092 ||| ||||| | || | |||||||||||| ||||| |||||||| || || || Sbjct 159848 TTTACCAGCAAAAATAAGACGCTGTTGGTCTGGGGGAATACCTTCCTTATCTTGGATCTT 159789 Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152 | || ||| | || || || ||||| |||||| || || || ||||| || || || Sbjct 159788 GGCCTTGACATTCTCGATCGTGTCGCTGGGTTCTACCTCCAAAGTGATGGTCTTTCCAGT 159729 Query 15153 CAGAGTTTTTACAAAAATTTGCATA 15177 || ||| || || || || |||||| Sbjct 159728 CAAAGTCTTGACGAAGATCTGCATA 159704 >seq263 Length=158529 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 |||||||| | || | || | ||| | || || || ||||| |||||||| || || Sbjct 64825 CCACCTCGAAGCCTGAGCACAAGATGCAACGTTGACTCCTTTTGAATGTTGTAGTCACTA 64884 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | || | ||||| | ||||| || || | ||||||||||||||||| || Sbjct 64885 AGGGTCCTACCATCTTCGAGCTGTTTACCGGCAAAGATCAAACGCTGTTGGTCTGGGGGG 64944 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 ||||| |||||||| || ||| || ||| |||| |||||||| || ||| || Sbjct 64945 ATTCCCTCCTTGTCTTGGATCTTGGCCTTGACATTTTCGATAGTATCACTGGGTTCAACC 65004 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || | ||| || ||||| || |||| ||||| ||||| || ||||| Sbjct 65005 TCAAGGGTGATAGTTTTCCCAGTCAATGTTTTCACAAAGATCTGCAT 65051 >seq47 Length=390960 Score = 100 bits (110), Expect = 2e-16 Identities = 145/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032 |||||||||||| || ||||| ||||||||||| || | | | || || || || Sbjct 276730 ATGAAGGGTAGACTCCTTTTGAATGTTGTAATCAGAAAGGGTACGGCCATCCTCCAACTG 276789 Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092 ||| ||||| | || | |||||| ||||| ||| || |||||||| || || || Sbjct 276790 TTTACCAGCAAAAATAAGACGCTGCTGGTCTGGTGGGATCCCTTCCTTATCCTGGATCTT 276849 Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152 | || ||| |||| || || || || ||| || || | || ||||| || || || Sbjct 276850 GGCCTTCACATTTTCAATGGTGTCACTGGGTTCCACCTCGAGAGTGATGGTCTTGCCAGT 276909 Query 15153 CAGAGTTTTTACAAAAATTTGCATA 15177 ||||| || |||||||| |||||| Sbjct 276910 AAGAGTCTTGACAAAAATCTGCATA 276934 Score = 95.1 bits (104), Expect = 9e-15 Identities = 159/229 (69%), Gaps = 1/229 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 |||||||| | | | || | |||||||||||| || ||||| ||||||||||| Sbjct 276251 CCACCTCGGAGACGAAGGACAAGATGAAGGGTAGACTCCTTTTGAATGTTGTAATCAGAA 276310 Query 15010 AGAATTCTCGCGTCTTCTAATTG-TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGG 15068 || | | | || || || || ||| ||||| | || | |||||| ||||| ||| Sbjct 276311 AGGGTACGGCCATCCTCCAACTGTTTTACCAGCAAAAATAAGACGCTGCTGGTCTGGTGG 276370 Query 15069 AATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128 || |||||||| || || ||| || ||| |||| || || || || ||| || Sbjct 276371 GATCCCTTCCTTATCCTGGATCTTGGCCTTCACATTTTCAATGGTGTCACTGGGTTCCAC 276430 Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || | || ||||| || || || ||||| || |||||||| |||||| Sbjct 276431 CTCGAGAGTGATGGTCTTGCCAGTAAGAGTCTTGACAAAAATCTGCATA 276479 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/228 (68%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 |||||||| | | | || | |||||||||||| || ||||| ||||||||||| Sbjct 276480 CCACCTCGGAGACGAAGGACAAGATGAAGGGTAGACTCCTTTTGAATGTTGTAATCAGAA 276539 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | | || || || || || ||||| | || | |||||| ||||| ||| Sbjct 276540 AGGGTGCGACCATCCTCCAACTGCTTTCCAGCAAAAATAAGACGCTGCTGGTCTGGTGGG 276599 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 ||||| ||||| || || || || ||| |||| || || || || ||| || Sbjct 276600 ATTCCCTCCTTATCTTGGATCTTAGCCTTGACATTTTCAATGGTGTCACTGGGTTCCACC 276659 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || | || ||||| || || || ||||| || |||||| ||||||| Sbjct 276660 TCGAGAGTGATGGTCTTGCCAGTAAGAGTCTTGACAAAA--TTGCATA 276705 Score = 82.4 bits (90), Expect = 5e-11 Identities = 157/229 (69%), Gaps = 3/229 (1%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 |||||||| | | | || | |||||||||||| || ||||| ||||||||||| Sbjct 277401 CCACCTCGGAGACGAAGGACAAGATGAAGGGTAGACTCCTTTTGAATGTTGTAATCAGAA 277460 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG-- 15067 || | | | || || || ||||| ||||| | || | |||||| || ||| || Sbjct 277461 AGGGTACGGCCATCCTCCAACTGTTTTCCAGCAAAGATAAGACGCTGCCGG-CGTCTGGT 277519 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 | || |||||||| || || ||| || ||| |||| ||||| || | || | Sbjct 277520 GGATCCCTTCCTTATCCTGGATCTTGGCCTTCACATTTTCAATAGTGTCTGAAGGCTCCA 277579 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 | || | || ||||| || || || ||||| || |||||||| ||||| Sbjct 277580 CCTCGAGAGTGATGGTCTTGCCAGTAAGAGTCTTGACAAAAATCTGCAT 277628 Score = 82.4 bits (90), Expect = 5e-11 Identities = 156/227 (69%), Gaps = 2/227 (1%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 |||||||| | | | || | |||||||||||| || ||||| ||||||||||| Sbjct 277630 CCACCTCGGAGACGAAGGACAAGATGAAGGGTAGACTCCTTTTGAATGTTGTAATCAGAA 277689 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | | ||| | || ||||| | ||| | || | |||||| ||||| ||| Sbjct 277690 AGCGTACGGCCATCTCC-AACTGTTTTC-AGCAAAGATAAGACGCTGCTGGTCTGGTGGG 277747 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || |||||||| || || ||| || ||| |||| ||||| ||| | || || Sbjct 277748 ATCCCTTCCTTATCCTGGATCTTGGCCTTCACATTTTCAATAGTGTCGGAAGGCTCCACC 277807 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || | || ||||| || || || || || || || ||||||||||| Sbjct 277808 TCGAGAGTGATGGTCTTGCCAGTGAGTGTCTTCACGAAAATTTGCAT 277854 >seq463 Length=112955 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 14989 TTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATC 15048 ||||| |||||||||||| ||| | || | || || | |||||| || || | ||| Sbjct 58489 TTTTGAATGTTGTAATCGGAGAGTGTCCTTCCATCCTCGAGTTGTTTTCCGGCAAAGATC 58430 Query 15049 AAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCT 15108 || ||||| || || || ||||| |||||||| || ||| || ||| | || Sbjct 58429 AACCGCTGCTGATCCGGGGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCG 58370 Query 15109 ATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAA 15168 || || || || ||| || || | || ||||||||||| || || ||||| || ||| Sbjct 58369 ATCGTGTCACTGGGTTCCACCTCAAGCGTGATGGTTTTACCCGTGAGGGTTTTAACGAAA 58310 Query 15169 ATTTGCATATTTGAA 15183 || ||||| || ||| Sbjct 58309 ATCTGCATTTTCGAA 58295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357351047567570