Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02]
9,402 sequences; 286,766,519 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq1326 104 3e-17
>seq1326
Length=48828
Score = 104 bits (114), Expect = 3e-17
Identities = 192/281 (68%), Gaps = 3/281 (1%)
Strand=Plus/Minus
Query 116314 ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATT 116373
|| ||||| ||||| ||||| | | || || ||| | ||||| ||||| | | |
Sbjct 33756 ACTGGATAGTAATTCACGTCGATGATTTTGTTCAGGTTTCTTGTGACCACCTTACTAACT 33697
Query 116374 TCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCG 116433
|| | | || | | ||||| | ||||| || || |||||| || | ||
Sbjct 33696 TCCTTCAATTTCTTGAAATCATATGTGCGA---TCAGGTTTCACATACATATTCACAGCA 33640
Query 116434 ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTA 116493
|| || |||| ||| ||||| | | |||||||| || ||||| | ||||| ||
Sbjct 33639 ATAGATGCCAAATTGCACACGGCTATTTCATCCTTTGAAGAATACTCGACTATTTCAGTG 33580
Query 116494 CACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCA 116553
||||||||||||| || ||||| || | |||| ||||| || ||| |||||||||
Sbjct 33579 CACAAATTTGAACATTTGATGGTTCCAAGATTCTGCTGATTGGATTTTCGATTACACGCA 33520
Query 116554 TCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGA 116594
|||||||| | || ||||| || || || || |||||||
Sbjct 33519 TCCTTGTACAACAAGTATGGTGTTCCAGTTTCGATTTGGGA 33479
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613435097566320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |