Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02] 9,402 sequences; 286,766,519 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq1326 104 3e-17 >seq1326 Length=48828 Score = 104 bits (114), Expect = 3e-17 Identities = 192/281 (68%), Gaps = 3/281 (1%) Strand=Plus/Minus Query 116314 ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATT 116373 || ||||| ||||| ||||| | | || || ||| | ||||| ||||| | | | Sbjct 33756 ACTGGATAGTAATTCACGTCGATGATTTTGTTCAGGTTTCTTGTGACCACCTTACTAACT 33697 Query 116374 TCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCG 116433 || | | || | | ||||| | ||||| || || |||||| || | || Sbjct 33696 TCCTTCAATTTCTTGAAATCATATGTGCGA---TCAGGTTTCACATACATATTCACAGCA 33640 Query 116434 ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTA 116493 || || |||| ||| ||||| | | |||||||| || ||||| | ||||| || Sbjct 33639 ATAGATGCCAAATTGCACACGGCTATTTCATCCTTTGAAGAATACTCGACTATTTCAGTG 33580 Query 116494 CACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCA 116553 ||||||||||||| || ||||| || | |||| ||||| || ||| ||||||||| Sbjct 33579 CACAAATTTGAACATTTGATGGTTCCAAGATTCTGCTGATTGGATTTTCGATTACACGCA 33520 Query 116554 TCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGA 116594 |||||||| | || ||||| || || || || ||||||| Sbjct 33519 TCCTTGTACAACAAGTATGGTGTTCCAGTTTCGATTTGGGA 33479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613435097566320