Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02] 9,402 sequences; 286,766,519 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq463 132 5e-26 seq159 95.1 1e-14 seq47 91.5 2e-13 >seq463 Length=112955 Score = 132 bits (146), Expect = 5e-26 Identities = 145/193 (75%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 ||||||| || ||||| ||||| || || | | || ||||| || || ||||| || | Sbjct 58491 CCTTTTGAATGTTGTAATCGGAGAGTGTCCTTCCATCCTCGAGTTGTTTTCCGGCAAAGA 58432 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 |||| |||||||| || | || | | |||||||||| |||||| ||||| || Sbjct 58431 TCAACCGCTGCTGATCCGGGGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCT 58372 Query 46524 CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAA 46583 | | |||||| || | |||||| || | |||||||||||| ||||| || |||||||| | Sbjct 58371 CGATCGTGTCACTGGGTTCCACCTCAAGCGTGATGGTTTTACCCGTGAGGGTTTTAACGA 58312 Query 46584 AGATTTGCATTTT 46596 | || |||||||| Sbjct 58311 AAATCTGCATTTT 58299 >seq159 Length=219009 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || ||||| | ||| | || ||||| | || |||||||||||| ||||||||| Sbjct 157786 CCACCTCTGAGACGGAGGACGAGATGAAGAGTGGACTCCTTTTGGATGTTGTAGTCGCTG 157727 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || || || | || || || ||||| || || || ||||| ||||||||||| | || Sbjct 157726 AGGGTACGGCCATCCTCAAGTTGCTTTCCAGCAAAGATCAAACGCTGCTGGTCTGGGGGA 157667 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | || |||||||| |||||| ||||| | | | ||||| | ||||| Sbjct 157666 ATGCCTTCCTTGTCTTGGATCTTAGCCTTGACATTTTCAATGGTGTCAGAAGGCTCCACC 157607 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | ||||| || || || |||| || || |||||||| ||||| Sbjct 157606 TCAAGGGTGATCGTCTTTCCAGTCAAAGTCTTGACAAAGATCTGCAT 157560 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| |||| | ||| | || ||||| | |||| ||||||||||||||||||||| Sbjct 159020 TGCCACCTCGGAGACGGAGGACGAGATGGAGTGTAGATTCCTTTTGGATATTGTAGTCGC 158961 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 || ||||| | || || | |||||| || || || || | ||||| || || | | Sbjct 158960 TGAGGGTGCGACCATCTTCCAACTGCTTTCCAGCAAAGATGAGACGCTGTTGATCTGGGG 158901 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | || ||||| || ||||| ||| | | | | |||||| | |||| Sbjct 158900 GAATGCCTTCCTTATCTTGAATCTTGGCCTTAACATTTTCGATGGTGTCGGAAGGCTCCA 158841 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATT 46594 | || | |||||||||||||| || || || || ||||| ||||||||| Sbjct 158840 CCTCAAGAGTGATGGTTTTGCCAGTAAGGGTCTTGACAAAAATTTGCATT 158791 Score = 93.3 bits (102), Expect = 5e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 || |||||||||||||||||| || || || | || || || ||||| || || || Sbjct 158754 TCTTTTTGGATATTGTAGTCGCTGAGGGTACGACCATCCTCAAGTTGCTTTCCAGCAAAG 158695 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | |||||||| || | || | | ||||| || |||||| ||||| || Sbjct 158694 ATGAGACGCTGCTGATCTGGGGGAATACCTTCCTTATCTTGGATCTTTGCCTTGACATTC 158635 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | |||||| || | |||||| || | |||||||| || || |||| ||| || || Sbjct 158634 TCGATCGTGTCACTGGGTTCCACCTCTAAAGTGATGGTCTTTCCAGTCAACGTCTTGACG 158575 Query 46583 AAGATTTGCAT 46593 ||||| ||||| Sbjct 158574 AAGATCTGCAT 158564 Score = 93.3 bits (102), Expect = 5e-14 Identities = 158/228 (69%), Gaps = 1/228 (0%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || ||||| | ||| | || ||||| | || |||||||||||| ||||||||| Sbjct 159475 CCACCTCTGAGACGGAGGACGAGATGAAGAGTGGACTCCTTTTGGATGTTGTAGTCGCTG 159416 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || || || | || || || ||||| || || || ||||| ||||||||||| | || Sbjct 159415 AGGGTTCGGCCATCCTCAAGTTGCTTTCCAGCAAAGATCAAACGCTGCTGGTCTGGGGGA 159356 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | || |||||||| |||||| ||||| | | | ||||| | ||||| Sbjct 159355 ATGCCTTCCTTGTCTTGGATCTTAGCCTTGACATTTTCAATGGTGTCAGAAGGCTCCACC 159296 Query 46547 TCCACCGTGATGGT-TTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | ||||| || ||| || |||| || || |||||||| ||||| Sbjct 159295 TCAAGGGTGATCGTCTTTTCCAGTCAAAGTCTTGACAAAGATCTGCAT 159248 Score = 86.0 bits (94), Expect = 7e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||||||||||||| || || || | || || || ||||| || || || Sbjct 159668 CTCCTTCTGGATATTGTAGTCGCTGAGGGTACGGCCATCCTCAAGTTGCTTTCCAGCAAA 159609 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||| ||||| ||||| | || | | |||||||| ||||| ||| | | Sbjct 159608 GATCAAACGCTGTTGGTCTGGGGGGATTCCTTCCTTGTCTTGAATCTTGGCCTTAACGTT 159549 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | ||||| | |||||| |||| ||||| || || || || ||||| ||||| Sbjct 159548 TTCGATAGTGTCAGAGGGTTCCACCTCCAATGTGATAGTCTTTCCTGTAAGCGTCTTAAC 159489 Query 46582 AAAGATTTGCAT 46593 ||||| ||||| Sbjct 159488 GAAGATCTGCAT 159477 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| |||| | ||| | || ||||| | || || || || || || ||||| | Sbjct 159248 TGCCACCTCGGAGACGGAGGACGAGATGAAGGGTGGATTCTTTCTGAATGTTATAGTCTG 159189 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | || || || | || || | || ||||| || || || | ||||||||||| | | Sbjct 159188 AAAGGGTACGTCCATCTTCCAATTGTTTGCCAGCAAAGATAAGACGCTGCTGGTCTGGGG 159129 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | || |||||||| |||||| ||||| || | | |||||| || | ||| | Sbjct 159128 GAATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATTCTCGATCGTGTCACTGGGTTCTA 159069 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || | |||||||| || || |||| ||||| || ||||| ||||| Sbjct 159068 CCTCTAAGGTGATGGTCTTTCCAGTCAAAGTTTTGACGAAGATCTGCAT 159020 >seq47 Length=390960 Score = 91.5 bits (100), Expect = 2e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || |||| | ||| | || ||||| | ||| ||||||||| || ||||| || || Sbjct 276480 CCACCTCGGAGACGAAGGACAAGATGAAGGGTAGACTCCTTTTGAATGTTGTAATCAGAA 276539 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || ||||| | || || | |||||| || || || || | ||||||||||| | || Sbjct 276540 AGGGTGCGACCATCCTCCAACTGCTTTCCAGCAAAAATAAGACGCTGCTGGTCTGGTGGG 276599 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | | |||||| || |||||| ||||| | | | ||||| || | |||||| Sbjct 276600 ATTCCCTCCTTATCTTGGATCTTAGCCTTGACATTTTCAATGGTGTCACTGGGTTCCACC 276659 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAA 46584 || | |||||||| ||||| || || || || ||||| Sbjct 276660 TCGAGAGTGATGGTCTTGCCAGTAAGAGTCTTGACAAA 276697 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 || ||||| | ||| ||||||||| || ||||| || || || || || | || || Sbjct 276725 ACAAGATGAAGGGTAGACTCCTTTTGAATGTTGTAATCAGAAAGGGTACGGCCATCCTCC 276784 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 | ||| || || || || || | ||||||||||| | || | | ||||| ||| | Sbjct 276785 AACTGTTTACCAGCAAAAATAAGACGCTGCTGGTCTGGTGGGATCCCTTCCTTATCCTGG 276844 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 ||||| ||| | | | | ||||| || | |||||| || | |||||||| ||| Sbjct 276845 ATCTTGGCCTTCACATTTTCAATGGTGTCACTGGGTTCCACCTCGAGAGTGATGGTCTTG 276904 Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || || || ||||| || ||||| Sbjct 276905 CCAGTAAGAGTCTTGACAAAAATCTGCAT 276933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565171970357040