Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02] 9,402 sequences; 286,766,519 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq159 134 1e-26 seq263 98.7 1e-15 seq463 96.9 3e-15 seq1672 89.7 5e-13 >seq159 Length=219009 Score = 134 bits (148), Expect = 1e-26 Identities = 167/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 ||||||||| || || || || || || |||||||||||||| | || || ||| | | Sbjct 158791 AATGCAAATTTTTGTCAAGACCCTTACTGGCAAAACCATCACTCTTGAGGTGGAGCCTTC 158850 Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 ||||| | | ||| |||| | || || | || || || || |||||| | || || Sbjct 158851 CGACACCATCGAAAATGTTAAGGCCAAGATTCAAGATAAGGAAGGCATTCCCCCAGATCA 158910 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| ||||| | || || || ||| |||| || | |||||||||| ||||||||| Sbjct 158911 ACAGCGTCTCATCTTTGCTGGAAAGCAGTTGGAAGATGGTCGCACCCTCAGCGACTACAA 158970 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||||||||||| | || || ||| | || || ||| | |||| ||| Sbjct 158971 TATCCAAAAGGAATCTACACTCCATCTCGTCCTCCGTCTCCGAGGTGGC 159019 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| ||||| || |||||| | || || ||| | | Sbjct 157332 ATGCAGATTTTCGTGAAGACACTCACTGGCAAGACGATCACCCTTGAGGTGGAGCCTTCT 157391 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | ||| | || | ||| || | || || || || |||||| | || ||| Sbjct 157392 GACACTATCGAAAATGTGAAGGCAAAGATTCAAGATAAGGAAGGCATTCCCCCAGATCAA 157451 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || || ||||| | || || || ||| |||| || | |||||||||| ||||||||| Sbjct 157452 CAACGTCTCATCTTTGCTGGAAAGCAGTTGGAAGATGGTCGCACCCTCAGCGACTACAAT 157511 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||||||||||| | || || ||| | || || ||| | |||| ||| Sbjct 157512 ATCCAAAAGGAATCTACACTCCATCTCGTCCTCCGTCTCCGAGGTGGC 157559 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || | || || || || |||||| | || || ||| | | Sbjct 157560 ATGCAGATCTTTGTCAAGACTTTGACTGGAAAGACGATCACCCTTGAGGTGGAGCCTTCT 157619 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | ||| | || | || |||| ||||| || || |||||| | ||||| Sbjct 157620 GACACCATTGAAAATGTCAAGGCTAAGATCCAAGACAAGGAAGGCATTCCCCCAGACCAG 157679 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| | || | || || || || || || || | || ||||||| |||||||||| Sbjct 157680 CAGCGTTTGATCTTTGCTGGAAAGCAACTTGAGGATGGCCGTACCCTCAGCGACTACAAC 157739 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||||| | || || ||| | || || ||| | ||||| || Sbjct 157740 ATCCAAAAGGAGTCCACTCTTCATCTCGTCCTCCGTCTCAGAGGTGG 157786 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || ||||| || || || || ||||| | || || || || | Sbjct 159477 ATGCAGATCTTCGTTAAGACGCTTACAGGAAAGACTATCACATTGGAGGTGGAACCCTCT 159536 Query 38304 GACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | ||||| |||| | || || | ||||| || ||||| ||| | ||||| Sbjct 159537 GACACTATCGAAAACG-TTAAGGCCAAGATTCAAGACAAGGAAGGAATCCCCCCAGACCA 159595 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| | || | || || || || || || || | || ||||||| ||||||||| Sbjct 159596 ACAGCGTTTGATCTTTGCTGGAAAGCAACTTGAGGATGGCCGTACCCTCAGCGACTACAA 159655 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| ||||| | || || ||| | || || ||| | |||| || Sbjct 159656 TATCCAGAAGGAGTCCACCCTTCATCTCGTCCTCCGTCTTCGAGGTGG 159703 Score = 96.9 bits (106), Expect = 3e-15 Identities = 159/228 (70%), Gaps = 1/228 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAA-ACCATCACCGTCGACGTCGAGGCCAC 38302 ||||| || || || || || | || || ||| || |||||| | || || ||| | | Sbjct 159248 ATGCAGATCTTTGTCAAGACTTTGACTGGAAAAGACGATCACCCTTGAGGTGGAGCCTTC 159307 Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | ||| | || | || |||| ||||| || || |||||| | ||||| Sbjct 159308 TGACACCATTGAAAATGTCAAGGCTAAGATCCAAGACAAGGAAGGCATTCCCCCAGACCA 159367 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| | || | || || || || || || || | || ||||||| ||||||||| Sbjct 159368 GCAGCGTTTGATCTTTGCTGGAAAGCAACTTGAGGATGGCCGAACCCTCAGCGACTACAA 159427 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||||||||| | || || ||| | || || ||| | ||||| || Sbjct 159428 CATCCAAAAGGAGTCCACTCTTCATCTCGTCCTCCGTCTCAGAGGTGG 159475 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/228 (70%), Gaps = 3/228 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || ||||| || || || || ||||| | || || || || | Sbjct 157788 ATGCAGATCTTTGTTAAGACGCTTACAGGAAAGACTATCACATTGGAGGTGGAACCCTCT 157847 Query 38304 GACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | ||||| |||| | || || | || || || ||||||||| | ||| | Sbjct 157848 GACACTATCGAAAACG-TTAAGGCCAAGATTCAAGATAAGGAAGGAATTCCCCCAGAC-A 157905 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| | || | || || || || || || || | || ||||||| ||||||||| Sbjct 157906 ACAGCGTTTGATCTTTGCTGGAAAGCAACTTGAGGATGGCCGTACCCTCAGCGACTACAA 157965 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| ||||| | || || ||| | || || ||| | ||||| || Sbjct 157966 CATCCAGAAGGAGTCCACCCTTCATCTCGTCCTCCGTCTCAGAGGTGG 158013 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || | || || || |||||||| | || || || ||| | Sbjct 159705 ATGCAGATCTTCGTCAAGACTTTGACTGGAAAGACCATCACTTTGGAGGTAGAACCCAGC 159764 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | || |||| || || || || |||||| | |||||| Sbjct 159765 GACACGATCGAGAATGTCAAGGCCAAGATCCAAGATAAGGAAGGTATTCCCCCAGACCAA 159824 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || |||| || || |||||| |||| || | || || ||| || ||||| Sbjct 159825 CAGCGTCTTATTTTTGCTGGTAAACAGTTGGAGGATGGACGTACTCTCTCTGATTACAAT 159884 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 || || |||||| |||| |||||| | || || ||| Sbjct 159885 ATTCAGAAGGAATCGACTCTGCATCTTGTCCTTCGT 159920 >seq263 Length=158529 Score = 98.7 bits (108), Expect = 1e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || ||||| | || || ||||| |||||| | || || || ||| Sbjct 65051 ATGCAGATCTTTGTGAAAACATTGACTGGGAAAACTATCACCCTTGAGGTTGAACCCAGT 64992 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | ||| | || | || |||| ||||| |||||||| ||| | |||||| Sbjct 64991 GATACTATCGAAAATGTCAAGGCCAAGATCCAAGACAAGGAGGGAATCCCCCCAGACCAA 64932 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| | || | || || |||||||| || || | | ||||| | ||||||||| Sbjct 64931 CAGCGTTTGATCTTTGCCGGTAAACAGCTCGAAGATGGTAGGACCCTTAGTGACTACAAC 64872 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455 || |||||||| | ||| ||||| | ||||| Sbjct 64871 ATTCAAAAGGAGTCAACGTTGCATCTTGTGCT 64840 >seq463 Length=112955 Score = 96.9 bits (106), Expect = 3e-15 Identities = 137/193 (71%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 |||||||| || ||||| ||||| |||||||| ||||||||||| | || || || || Sbjct 58299 AAAATGCAGATTTTCGTTAAAACCCTCACGGGTAAAACCATCACGCTTGAGGTGGAACCC 58358 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 | |||| | | | | || | || |||| ||||| |||||||| ||| | || Sbjct 58359 AGTGACACGATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGAGGGAATCCCCCCGGAT 58418 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 || |||||| | || | || || ||||| || || || | | || ||| ||| ||| Sbjct 58419 CAGCAGCGGTTGATCTTTGCCGGAAAACAACTCGAGGATGGAAGGACACTCTCCGATTAC 58478 Query 38421 AACATCCAAAAGG 38433 ||||| ||||||| Sbjct 58479 AACATTCAAAAGG 58491 >seq1672 Length=38749 Score = 89.7 bits (98), Expect = 5e-13 Identities = 103/139 (74%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 133186 GAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCC 133245 || |||||||| || || || || ||||| || || ||||| ||||||||||| || || Sbjct 32221 GAGTACATTTCGGAATGCACATTTTCCATCGCAATCTGAAATCCGTAAAAGCATCGGGCT 32162 Query 133246 TCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCG 133305 ||| || |||||||| || ||| ||||| |||| |||||||| || || || || Sbjct 32161 TCGGTGACTTGCACTTCCTGGCTGAATCGCTCCACCAAGTTTTCGTTAACAATTCCATCA 32102 Query 133306 CTGGCGGCGAAAAAGGCCA 133324 || || || ||||||| Sbjct 32101 GATGCTGCAAAGAAGGCCA 32083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500114017191680