Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02] 9,402 sequences; 286,766,519 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq1672 82.4 9e-11 >seq1672 Length=38749 Score = 82.4 bits (90), Expect = 9e-11 Identities = 147/211 (70%), Gaps = 8/211 (4%) Strand=Plus/Plus Query 102106 AAACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTG---ATACAA 102162 |||| | ||||| || | ||||| || || |||||| || ||| ||| ||| | Sbjct 32390 AAACCATGCCATGCGTTAAGAAGAAGGCTGACTGGGCTCTGTCCTGGATTGCTGATAAGA 32449 Query 102163 AGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCT 102222 | || | | |||||||| | | | || ||||| ||||| || || || |||| Sbjct 32450 ACTC---TACTTTTGCTGAAAGGGTGATTGCTTTTGCAGCAGTTGAAGGGATATTTTTCT 32506 Query 102223 CTGGTTCCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGC 102281 |||| ||| ||| | || | |||||||||||||| || || |||||||| || | Sbjct 32507 CTGGAAGCTT-TGCATCCATCTTCTGGCTCAAGAAGCGTGGACTTATGCCAGGCCTGACC 32565 Query 102282 TTCTCCAACGAGCTTATCTCTCGTGACGAGG 102312 || |||||||||||||||||||| |||| Sbjct 32566 TTTAGTAACGAGCTTATCTCTCGTGATGAGG 32596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620669447249440