Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02]
9,402 sequences; 286,766,519 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq591 95.1 1e-14
>seq591
Length=94433
Score = 95.1 bits (104), Expect = 1e-14
Identities = 115/153 (75%), Gaps = 3/153 (2%)
Strand=Plus/Plus
Query 154953 GGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGG-ACTAGCAAAACCATG 155011
|||||||| || ||||||||||||||| | |||||||| || || | | || ||| |
Sbjct 27985 GGTCAGGTTTACCTTGATGGAGCAAATATGAATGCACAAGTTGGTATTTGC-CGACCTGG 28043
Query 155012 TGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCACATGG 155071
|| ||||| | || || | |||||| ||| | ||||||||||| || ||||| ||| |
Sbjct 28044 CGATTATGGATCTGACGTTTCTCATCTTAACCTTCATAAAACATTTTGCATTCCTCAT-G 28102
Query 155072 AGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGT 155104
||| || ||||| || | || ||||| || ||
Sbjct 28103 AGGGGGCGGTCCAGGAATGGGACCTATTGGAGT 28135
Score = 82.4 bits (90), Expect = 9e-11
Identities = 99/135 (73%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 153294 CCCTATCAAGCTGAGATATCTCAGGGAAGATTGGAAGCTTTATTCAATTACCAAACGCTC 153353
|| || ||| |||| || |||| ||| | |||||| | | || |||||||| |
Sbjct 25414 CCATACCAACCTGAAATCGCTCAAGGACGCCTGGAAGGGCTCCTAAACTACCAAACTATG 25473
Query 153354 ATCACAGAACTTACAGGATTACCAATAGCAAACGCATCTCTATTAGATGAAGCAACTGCA 153413
|||| || | |||||| | ||| |||||||||| || | |||||||||| |||||
Sbjct 25474 GTCACTGATTTAACAGGACTGCCAGTAGCAAACGCTTCATTGTTAGATGAAGGTACTGCT 25533
Query 153414 GCAGCAGAAGCAATG 153428
|| ||||||||||||
Sbjct 25534 GCTGCAGAAGCAATG 25548
Score = 82.4 bits (90), Expect = 9e-11
Identities = 104/143 (73%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 153885 GGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAA 153944
||||| | |||| || | || || ||||||||||| || || || | | ||||||
Sbjct 26261 GGTAAAGATGCATTTCGACTTGCTCTTCAGACTAGAGAACAACACATTCGCCGTGACAAA 26320
Query 153945 GCAACCAGTAACATCTGCACAGCTCAGGCACTGCTGGCTAATATGTCTGGATTCTATGCA 154004
|| || |||||||| ||||||||||| || ||| | || || ||||||| | | |||
Sbjct 26321 GCCACAAGTAACATTTGCACAGCTCAAGCCCTGTTAGCAAACATGTCTGCCATGTTCGCA 26380
Query 154005 GCATATCATGGTGCAGATGGACT 154027
| ||||||||| || | || ||
Sbjct 26381 GTTTATCATGGTCCAAAAGGGCT 26403
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579144728015680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |