Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02] 9,402 sequences; 286,766,519 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq591 82.4 9e-11 >seq591 Length=94433 Score = 82.4 bits (90), Expect = 9e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 157969 CCCTATCAAGCTGAGATATCTCAGGGAAGATTGGAAGCTTTATTCAATTACCAAACGCTC 158028 || || ||| |||| || |||| ||| | |||||| | | || |||||||| | Sbjct 25414 CCATACCAACCTGAAATCGCTCAAGGACGCCTGGAAGGGCTCCTAAACTACCAAACTATG 25473 Query 158029 ATCACAGAACTCACAGGACTACCGATAGCAAACGCATCTCTATTAGATGAAGCAACTGCA 158088 |||| || | |||||||| || |||||||||| || | |||||||||| ||||| Sbjct 25474 GTCACTGATTTAACAGGACTGCCAGTAGCAAACGCTTCATTGTTAGATGAAGGTACTGCT 25533 Query 158089 GCAGCAGAAGCAATG 158103 || |||||||||||| Sbjct 25534 GCTGCAGAAGCAATG 25548 Score = 82.4 bits (90), Expect = 9e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 158560 GGTAATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAA 158619 ||||| | |||| || | || || ||||||||||| || || || | | |||||| Sbjct 26261 GGTAAAGATGCATTTCGACTTGCTCTTCAGACTAGAGAACAACACATTCGCCGTGACAAA 26320 Query 158620 GCAACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAATATGTCTGGGTTCTATGCA 158679 || || |||||||| |||||||| ||||| ||| | || || ||||||| | | ||| Sbjct 26321 GCCACAAGTAACATTTGCACAGCTCAAGCCCTGTTAGCAAACATGTCTGCCATGTTCGCA 26380 Query 158680 GCATATCATGGTGCAGATGGACT 158702 | ||||||||| || | || || Sbjct 26381 GTTTATCATGGTCCAAAAGGGCT 26403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587982089282720