Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02] 9,402 sequences; 286,766,519 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq1672 89.7 6e-13 >seq1672 Length=38749 Score = 89.7 bits (98), Expect = 6e-13 Identities = 106/141 (75%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 36825 TTTTAAAAATCTTCATCTAACGTAAATTTTATTTCCTTATTACTATTCATAACTCCCATT 36884 ||||||||||| |||| | |||||| ||||| | || | ||||| ||||| Sbjct 33151 TTTTAAAAATCAGCATCCAGGGTAAATACCATTTCATCCTTTTTGTTCATGACTCCTGCC 33092 Query 36885 TTTTGATATTCTCCAACTCGTCTTTCGAAAAAA-TTTGTCTTTCCTTCTAGTGATATATT 36943 ||||| || || ||||| | ||||| ||| || ||||| || ||||| ||||| |||| Sbjct 33091 TTTTGGTACTCGCCAAC-CTTCTTTTCAAAGAAGTTTGTTTTGCCTTCCAGTGAGATATG 33033 Query 36944 TTCCATAAAATCAAATGGATT 36964 |||||||||||||| ||||| Sbjct 33032 CTCCATAAAATCAAAGGGATT 33012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592247187968080