Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02] 9,402 sequences; 286,766,519 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq25 113 6e-20 >seq25 Length=472337 Score = 113 bits (124), Expect = 6e-20 Identities = 141/187 (75%), Gaps = 5/187 (3%) Strand=Plus/Minus Query 197101 AAGAAAGCG-CCGTAGGTTCCCGTTCTCTTTCCCACCCCGTTGAAGCCTCCGATAACCAC 197159 |||||| | ||||| || || ||||||||||| ||||||||||| |||||||| || Sbjct 102676 AAGAAACCCTCCGTATGTGCCAGTTCTCTTTCCTTTACCGTTGAAGCCACCGATAACTAC 102617 Query 197160 CAGATCCAGAGTGTCGCACACCCCT-TCCATGTAATCTTTCTTCAGTTTGAGCCAGCTTC 197218 || |||| | |||| | || || ||||| ||||| || |||||||| | ||| ||| Sbjct 102616 CAAGTCCAAGGAATCGC-CTCCACTGTCCATATAATCCTTTTTCAGTTTCAACCA-TTTC 102559 Query 197219 T-AGATCTCTTGGCAATCTCGTAGGTTGCGTTTACGTCCAGGGTCTTGATCATCAATCCC 197277 | |||| ||| |||| |||||| | || ||| | |||| ||||| | ||||| |||| Sbjct 102558 TGGGATCGCTTCGCAAGCTCGTAAGAGGCCTTTTCATCCAATGTCTTCACCATCAGTCCC 102499 Query 197278 TCGCAAT 197284 || |||| Sbjct 102498 TCACAAT 102492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676650067353760