Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02] 9,402 sequences; 286,766,519 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq1672 91.5 3e-13 seq1326 89.7 1e-12 >seq1672 Length=38749 Score = 91.5 bits (100), Expect = 3e-13 Identities = 132/185 (71%), Gaps = 6/185 (3%) Strand=Plus/Plus Query 25597 GTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGATTC 25656 || ||||| ||||||||||| |||||||| || || ||||| || || ||| ||||| Sbjct 32079 GTCTTGGCCTTCTTTGCAGCATCTGATGGAATTGTTAACGAAAACTTGGTGGAGCGATTC 32138 Query 25657 ACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATCGAA 25716 | | ||||||||| | || ||| || || ||||| || ||||| || || ||| Sbjct 32139 AGCCAGGAAGTGCAAGTCACCGAAGCCCGATGCTTTTACGGATTTCAGATTGCGATGGAA 32198 Query 25717 AATGTGCACTCTGAGGTGTATGCCAAGCTTCTGAT---GACGTACATTACAGACGTCGCC 25773 |||||||| || || |||| || ||| |||| |||||||||| || || || Sbjct 32199 AATGTGCATTCCGAAATGTACTCC---CTTTTGATTGACACGTACATTAAGGATGTTGCA 32255 Query 25774 GAGAG 25778 || || Sbjct 32256 GAAAG 32260 >seq1326 Length=48828 Score = 89.7 bits (98), Expect = 1e-12 Identities = 130/184 (71%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 221999 GGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATC 222058 ||||||||||||| ||||| |||| || ||| |||| |||||| | || || ||| Sbjct 33263 GGACACATCAGACACCAGTCACCGTTGCTTTCGACTCTCTTCATGAATAAATCGGGAATC 33204 Query 222059 CACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGA 222118 |||| || ||| | ||| || | || | ||| || || |||||||| ||| Sbjct 33203 CACATGGCAAAAAACAAATCCCTTGCACGATTCTCTTCTTTCCCAGTGTTTTTCTTCAAG 33144 Query 222119 TCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGT 222178 |||||||| ||||| | || || |||||||| |||| ||| | || | ||||| ||| Sbjct 33143 TCCAAAAATTCAAAGACATCTGCATGCCACGGTTCCAAATACATAGCGAACGCGCCAGGT 33084 Query 222179 CGCT 222182 | || Sbjct 33083 CTCT 33080 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928735637514880