Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02] 9,402 sequences; 286,766,519 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq1326 96.9 2e-15 >seq1326 Length=48828 Score = 96.9 bits (106), Expect = 2e-15 Identities = 162/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 26080 TCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCC 26139 |||||||||||| ||||||||||| || | |||| | ||| ||| ||| ||||| || || Sbjct 32965 TCCACCTTGATCCACGTATCTTGCCGTGTTATTGTAGACTCTCAGCATAGGAACCAAACC 32906 Query 26140 AGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATG 26199 | || | |||||| || | | ||| | || ||||| | || || |||| ||| Sbjct 32905 GTTGGAGATTCCGTTGGTACCACCAATGTACGACCCTGTTGCCCTGATGCAGTGAACATT 32846 Query 26200 AATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTGAAACTGTATCGAAAAT 26259 | ||||| |||||||| | ||| ||||| ||| || | || ||||| |||| Sbjct 32845 GAGTCCGATGCCACCAGCGCTTTTAGAAATCAATGCGCACTGCTTAAGAGTATCATAAAT 32786 Query 26260 TCCTTTTATGCTATCACCTTTCATTCCTAATAA-AAAACAAGAAGATAATTG 26310 ||||| ||||| || | | |||| ||| || || ||||| || | ||| Sbjct 32785 TCCTTCAATGCTGTCTTCCTGCATT-GTAAGAAGGAAGCAAGAGGAAAGTTG 32735 Score = 95.1 bits (104), Expect = 6e-15 Identities = 107/141 (76%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 25922 TCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTC 25981 || ||| ||| ||| |||||||| ||||||||||| ||| |||| ||||| || || | Sbjct 33233 TCGACTCTCTTCATGAATAAATCGGGAATCCACATGGCAAAAAACAAATCCCTTGCACGA 33174 Query 25982 ATTTCTTCTTTTCC-GTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCA 26040 | |||||||| || ||| || || || | || || || ||||| | ||||| ||||| Sbjct 33173 TTCTCTTCTTTCCCAGTG-TTTTTCTTCAAGTCCAAAAATTCAAAGACATCTGCATGCCA 33115 Query 26041 TGGTTCTAAATAGATAGCAAA 26061 ||||| ||||| ||||| || Sbjct 33114 CGGTTCCAAATACATAGCGAA 33094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253011004937150