Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02]
9,402 sequences; 286,766,519 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq1326 96.9 2e-15
>seq1326
Length=48828
Score = 96.9 bits (106), Expect = 2e-15
Identities = 162/232 (70%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 26080 TCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCC 26139
|||||||||||| ||||||||||| || | |||| | ||| ||| ||| ||||| || ||
Sbjct 32965 TCCACCTTGATCCACGTATCTTGCCGTGTTATTGTAGACTCTCAGCATAGGAACCAAACC 32906
Query 26140 AGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATG 26199
| || | |||||| || | | ||| | || ||||| | || || |||| |||
Sbjct 32905 GTTGGAGATTCCGTTGGTACCACCAATGTACGACCCTGTTGCCCTGATGCAGTGAACATT 32846
Query 26200 AATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTGAAACTGTATCGAAAAT 26259
| ||||| |||||||| | ||| ||||| ||| || | || ||||| ||||
Sbjct 32845 GAGTCCGATGCCACCAGCGCTTTTAGAAATCAATGCGCACTGCTTAAGAGTATCATAAAT 32786
Query 26260 TCCTTTTATGCTATCACCTTTCATTCCTAATAA-AAAACAAGAAGATAATTG 26310
||||| ||||| || | | |||| ||| || || ||||| || | |||
Sbjct 32785 TCCTTCAATGCTGTCTTCCTGCATT-GTAAGAAGGAAGCAAGAGGAAAGTTG 32735
Score = 95.1 bits (104), Expect = 6e-15
Identities = 107/141 (76%), Gaps = 2/141 (1%)
Strand=Plus/Minus
Query 25922 TCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTC 25981
|| ||| ||| ||| |||||||| ||||||||||| ||| |||| ||||| || || |
Sbjct 33233 TCGACTCTCTTCATGAATAAATCGGGAATCCACATGGCAAAAAACAAATCCCTTGCACGA 33174
Query 25982 ATTTCTTCTTTTCC-GTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCA 26040
| |||||||| || ||| || || || | || || || ||||| | ||||| |||||
Sbjct 33173 TTCTCTTCTTTCCCAGTG-TTTTTCTTCAAGTCCAAAAATTCAAAGACATCTGCATGCCA 33115
Query 26041 TGGTTCTAAATAGATAGCAAA 26061
||||| ||||| ||||| ||
Sbjct 33114 CGGTTCCAAATACATAGCGAA 33094
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253011004937150
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |