Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02] 9,402 sequences; 286,766,519 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq118 109 7e-19 >seq118 Length=272213 Score = 109 bits (120), Expect = 7e-19 Identities = 167/234 (71%), Gaps = 12/234 (5%) Strand=Plus/Plus Query 47845 TCGACATAATCTCTGGCATGTCCCCAGTCACGAAGTGCATCAAGATTTCCTAGATATAAA 47904 || ||||| ||||||||||||||||| || | || || | |||||| || | ||| Sbjct 111138 TCAACATAGTCTCTGGCATGTCCCCAATCTCTTTTAGCGTCCAAATTTCCAAGCTCAAAA 111197 Query 47905 CAGTC---TTGCTTACCTTCAGAGATTGCTTT---TAATGCTCTTGTAATCTTACGAGTT 47958 | || ||| | || || || | ||| || || | ||||| || | || Sbjct 111198 TATTCAATTTG--TCCCA--AGTGAAT--TTTAGCTACTGAACGGGTAATTTTTCTGGTA 111251 Query 47959 ACAAAAGTTTCACCACGTCTTGGAGATTCATGATTAAAAAGAATACCACTACAGGCATAC 48018 ||||| ||||||| ||||||||| ||| ||||| || | ||| ||| | || |||||| Sbjct 111252 ACAAAGTTTTCACCTCGTCTTGGACTTTCGTGATTGAATAAAATTCCATTGCATGCATAC 111311 Query 48019 ATTCCGTATGATTCACGATAGTTCTTTACTATCCAGTACCCATAGAGTTTTGCA 48072 ||||| |||| ||| |||||||| ||||||||||||| | || || |||||| Sbjct 111312 ATTCCATATGCTTCGCGATAGTTAGTTACTATCCAGTAAGCGTATAGCTTTGCA 111365 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665416187770640