Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02]
9,402 sequences; 286,766,519 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq159 96.9 6e-15
seq463 84.2 4e-11
>seq159
Length=219009
Score = 96.9 bits (106), Expect = 6e-15
Identities = 160/230 (70%), Gaps = 1/230 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||||||||| | || || || ||||| | || | ||| || || || ||||||
Sbjct 158016 ATACCACCTCTGAGACGGAGGACGAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCG 157957
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
| || | ||| || | ||| ||||| ||||| || || | |||||| || ||
Sbjct 157956 CTGAGGGTACGGCCATCCTCAAGTTGCTTTCCAGCAAAGATCAAACGCTGTTG-TCTGGG 157898
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| |||||||| |||||||| || |||| || | ||| ||||| || || | ||
Sbjct 157897 GGAATTCCTTCCTTATCTTGAATCTTGGCCTTAACGTTTTCGATAGTGTCAGAGGGTTCC 157838
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || | || ||||| || ||||| ||||| || ||||| || |||||
Sbjct 157837 ACCTCCAATGTGATAGTCTTTCCTGTAAGCGTCTTAACAAAGATCTGCAT 157788
Score = 84.2 bits (92), Expect = 4e-11
Identities = 158/231 (68%), Gaps = 1/231 (0%)
Strand=Plus/Minus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
||||||||||| | || || || ||||| | || | ||| || || || ||||||
Sbjct 159478 ATACCACCTCTGAGACGGAGGACGAGATGAAGAGTGGACTCCTTTTGGATGTTGTAGTCG 159419
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
| |||| ||| || | ||| ||||| ||||| || || | ||| || || ||
Sbjct 159418 CTGAGGGTTCGGCCATCCTCAAGTTGCTTTCCAGCAAAGATCAAACGCTGCTGGTCTGGG 159359
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
|| || ||||| || ||||| || || | || | |||| ||| || || |||| |||
Sbjct 159358 GGAATGCCTTCCTTGTCTTGGATCTTAGCCTTGACATTTTCAATGGTGTCAGAAGGCTCC 159299
Query 193311 ACTTCTAGAGTTATAGT-TTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || || || || || ||| || || | || || ||||| || |||||
Sbjct 159298 ACCTCAAGGGTGATCGTCTTTTCCAGTCAAAGTCTTGACAAAGATCTGCAT 159248
>seq463
Length=112955
Score = 84.2 bits (92), Expect = 4e-11
Identities = 130/186 (70%), Gaps = 0/186 (0%)
Strand=Plus/Minus
Query 193178 AATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCT 193237
||| || || ||||| | || || ||| || | ||||||||||||||| || || |
Sbjct 58484 AATGTTGTAATCGGAGAGTGTCCTTCCATCCTCGAGTTGTTTTCCGGCAAAGATCAACCG 58425
Query 193238 CTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGT 193297
||| ||||| || || ||||| || || || || || |||| || | ||| || ||
Sbjct 58424 CTGCTGATCCGGGGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATCGT 58365
Query 193298 ATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTG 193357
|| | || || || || || || |||||||| || || ||||| || || || ||
Sbjct 58364 GTCACTGGGTTCCACCTCAAGCGTGATGGTTTTACCCGTGAGGGTTTTAACGAAAATCTG 58305
Query 193358 CATTTT 193363
||||||
Sbjct 58304 CATTTT 58299
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899548668116640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |