Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02]
9,402 sequences; 286,766,519 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq159 102 2e-16
seq47 100 6e-16
seq463 87.8 4e-12
>seq159
Length=219009
Score = 102 bits (112), Expect = 2e-16
Identities = 110/146 (75%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
||||||||||| ||||| | || | ||| | || | ||| || |||||| || ||
Sbjct 158565 ATACCACCTCTGAGACGGAGGACGAGATGAAGGGTGGACTCCTTCTGGATATTGTAGTCC 158506
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| | |||||| | || ||||||||||||||||||||||| | | ||| ||||| ||
Sbjct 158505 GACAGTGTTCGGCCGTCTTCCAATTGTTTACCAGCAAAGATGAGACGCTGCTGATCTGGG 158446
Query 192427 GGTATTCCTTCTTTATCTTGTATTTT 192452
|| || ||||| || ||||| |||||
Sbjct 158445 GGAATACCTTCCTTGTCTTGAATTTT 158420
Score = 100 bits (110), Expect = 6e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|||||||| | |||||| | || | ||| | || | ||||| || ||||| ||
Sbjct 158244 ATACCACCACGAAGACGAAGGACGAGATGAAGGGTGGATTCTTTTTGAATGTTATAGTCT 158185
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| |||||||| | || ||||| || || ||||||||||| | | ||| ||||| ||
Sbjct 158184 GACAATGTTCGGCCGTCTTCCAACTGCTTTCCAGCAAAGATGAGACGCTGCTGATCTGGG 158125
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || ||||| |||||||| || ||| || ||||| || | || || | ||
Sbjct 158124 GGGATACCTTCCTTATCTTGAATCTTAGCCTTAACATTTTCGATGGTGTCAGAGGGCTCC 158065
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||||| | || ||||| || || || | || || | ||| ||||||||
Sbjct 158064 ACTTCCAATGTGATGGTCTTTCCTGTAAGGGTCTTGACAAAGATCTGCAT 158015
Score = 98.7 bits (108), Expect = 2e-15
Identities = 131/182 (72%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 192355 ATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTC 192414
||||| |||||||| | || ||| |||| ||||| |||||||||||||| || | | |
Sbjct 159886 ATATTGTAATCAGAGAGAGTACGTCCATCCTCCAACTGTTTACCAGCAAAAATAAGACGC 159827
Query 192415 TGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAA 192474
||||| || || || || ||||| |||||||| || || || ||||| || |
Sbjct 159826 TGTTGGTCTGGGGGAATACCTTCCTTATCTTGGATCTTGGCCTTGACATTCTCGATCGTG 159767
Query 192475 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGC 192534
|| | |||||| || | ||| ||||| || ||||| || || || | || ||||||
Sbjct 159766 TCGCTGGGTTCTACCTCCAAAGTGATGGTCTTTCCAGTCAAAGTCTTGACGAAGATCTGC 159707
Query 192535 AT 192536
||
Sbjct 159706 AT 159705
Score = 95.1 bits (104), Expect = 2e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|| ||||||| ||||| | || | ||| | || | ||||| || ||||| ||
Sbjct 159249 ATGCCACCTCGGAGACGGAGGACGAGATGAAGGGTGGATTCTTTCTGAATGTTATAGTCT 159190
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| | || ||| |||| ||||||||||| ||||||||||| | | ||| || || ||
Sbjct 159189 GAAAGGGTACGTCCATCTTCCAATTGTTTGCCAGCAAAGATAAGACGCTGCTGGTCTGGG 159130
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || ||||| || ||||| || || || ||||| || | || | ||||
Sbjct 159129 GGAATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATTCTCGATCGTGTCACTGGGTTCT 159070
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| |||| || ||||| || ||||| || ||||| | || ||||||||
Sbjct 159069 ACCTCTAAGGTGATGGTCTTTCCAGTCAAAGTTTTGACGAAGATCTGCAT 159020
Score = 93.3 bits (102), Expect = 8e-14
Identities = 159/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|| ||||||| ||||| | || | ||| | |||| || || |||||| || ||
Sbjct 159021 ATGCCACCTCGGAGACGGAGGACGAGATGGAGTGTAGATTCCTTTTGGATATTGTAGTCG 158962
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
| || || |||| ||||| || || ||||||||||| | | ||||||||| ||
Sbjct 158961 CTGAGGGTGCGACCATCTTCCAACTGCTTTCCAGCAAAGATGAGACGCTGTTGATCTGGG 158902
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || ||||| |||||||| || || || ||||| || | || || | ||
Sbjct 158901 GGAATGCCTTCCTTATCTTGAATCTTGGCCTTAACATTTTCGATGGTGTCGGAAGGCTCC 158842
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537
|| || ||||| |||||||| ||||| | || || | ||| || ||||||
Sbjct 158841 ACCTCAAGAGTGATGGTTTTGCCAGTAAGGGTCTTGACAAAAATTTGCATT 158791
Score = 89.7 bits (98), Expect = 1e-12
Identities = 159/231 (69%), Gaps = 1/231 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
||||||||||| ||||| | || | ||| | ||| | ||| || ||| || || ||
Sbjct 159478 ATACCACCTCTGAGACGGAGGACGAGATGAAGAGTGGACTCCTTTTGGATGTTGTAGTCG 159419
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
| ||||| |||| || | ||| || ||||||||||| || | ||| || || ||
Sbjct 159418 CTGAGGGTTCGGCCATCCTCAAGTTGCTTTCCAGCAAAGATCAAACGCTGCTGGTCTGGG 159359
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || ||||| || ||||| || ||| || ||||| || | || || | ||
Sbjct 159358 GGAATGCCTTCCTTGTCTTGGATCTTAGCCTTGACATTTTCAATGGTGTCAGAAGGCTCC 159299
Query 192487 ACTTCTAGAGTAATGGT-TTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || || || || || ||| ||||| || || || | ||| ||||||||
Sbjct 159298 ACCTCAAGGGTGATCGTCTTTTCCAGTCAAAGTCTTGACAAAGATCTGCAT 159248
Score = 86.0 bits (94), Expect = 1e-11
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
||||||||||| ||||| | || | ||| | ||| | ||| || ||| || || ||
Sbjct 157789 ATACCACCTCTGAGACGGAGGACGAGATGAAGAGTGGACTCCTTTTGGATGTTGTAGTCG 157730
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
| || || |||| || | ||| || ||||||||||| || | ||| || || ||
Sbjct 157729 CTGAGGGTACGGCCATCCTCAAGTTGCTTTCCAGCAAAGATCAAACGCTGCTGGTCTGGG 157670
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || ||||| || ||||| || ||| || ||||| || | || || | ||
Sbjct 157669 GGAATGCCTTCCTTGTCTTGGATCTTAGCCTTGACATTTTCAATGGTGTCAGAAGGCTCC 157610
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || || || || || || ||||| || || || | ||| ||||||||
Sbjct 157609 ACCTCAAGGGTGATCGTCTTTCCAGTCAAAGTCTTGACAAAGATCTGCAT 157560
>seq47
Length=390960
Score = 100 bits (110), Expect = 6e-16
Identities = 165/233 (71%), Gaps = 5/233 (2%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATC 192365
|||||||||| ||||| | || | ||| | |||| ||| ||| || || || |||||
Sbjct 277398 ATACCACCTCGGAGACGAAGGACAAGATGAAGGGTAGACTCCTTTTGA-ATGTTGTAATC 277456
Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTG--ATCA 192423
||| | || || |||| ||||| ||||| ||||||||||| | | ||| | ||
Sbjct 277457 AGAAAGGGTACGGCCATCCTCCAACTGTTTTCCAGCAAAGATAAGACGCTGCCGGCGTCT 277516
Query 192424 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGAT 192483
||||| || ||||| ||||| || || || || ||||| |||| ||||| |
Sbjct 277517 GGTGG-ATCCCTTCCTTATCCTGGATCTTGGCCTTCACATTTTCAATAGTGTCTGAAGGC 277575
Query 192484 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || || ||||| ||||| || ||||| | || || | ||| ||||||||
Sbjct 277576 TCCACCTCGAGAGTGATGGTCTTGCCAGTAAGAGTCTTGACAAAAATCTGCAT 277628
Score = 96.9 bits (106), Expect = 7e-15
Identities = 163/232 (70%), Gaps = 3/232 (1%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATC 192365
|||||||||| ||||| | || | ||| | |||| ||| ||| || || || |||||
Sbjct 276248 ATACCACCTCGGAGACGAAGGACAAGATGAAGGGTAGACTCCTTTTGA-ATGTTGTAATC 276306
Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTT-ACCAGCAAAGATTAATCTCTGTTGATCAG 192424
||| | || || |||| ||||| ||||| ||||||||| || | | ||| || || |
Sbjct 276307 AGAAAGGGTACGGCCATCCTCCAACTGTTTTACCAGCAAAAATAAGACGCTGCTGGTCTG 276366
Query 192425 GTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATT 192484
|||| || ||||| ||||| || || || || ||||| || | || | ||
Sbjct 276367 GTGGGATCCCTTCCTTATCCTGGATCTTGGCCTTCACATTTTCAATGGTGTCACTGGGTT 276426
Query 192485 CTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
| || || ||||| ||||| || ||||| | || || | ||| ||||||||
Sbjct 276427 CCACCTCGAGAGTGATGGTCTTGCCAGTAAGAGTCTTGACAAAAATCTGCAT 276478
Score = 96.9 bits (106), Expect = 7e-15
Identities = 163/232 (70%), Gaps = 3/232 (1%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTA-AGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAAT 192364
|||||||||| ||||| | || | ||| | |||| ||| ||| || || || ||||
Sbjct 276703 ATACCACCTCGGGAGACGAAGGACAAGATGAAGGGTAGACTCCTTTTGA-ATGTTGTAAT 276761
Query 192365 CAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAG 192424
|||| | || || |||| ||||| |||||||||||||| || | | ||| || || |
Sbjct 276762 CAGAAAGGGTACGGCCATCCTCCAACTGTTTACCAGCAAAAATAAGACGCTGCTGGTCTG 276821
Query 192425 GTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATT 192484
|||| || ||||| ||||| || || || || ||||| || | || | ||
Sbjct 276822 GTGGGATCCCTTCCTTATCCTGGATCTTGGCCTTCACATTTTCAATGGTGTCACTGGGTT 276881
Query 192485 CTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
| || || ||||| ||||| || ||||| | || || | ||| ||||||||
Sbjct 276882 CCACCTCGAGAGTGATGGTCTTGCCAGTAAGAGTCTTGACAAAAATCTGCAT 276933
Score = 86.0 bits (94), Expect = 1e-11
Identities = 167/236 (71%), Gaps = 8/236 (3%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATC 192365
|||||||||| ||||| | || | ||| | |||| ||| ||| || || || |||||
Sbjct 277166 ATACCACCTCGGAGACGAAGGACAAGATGAAGGGTAGACTCCTTTTGA-ATGTTGTAATC 277224
Query 192366 AGATAATGTTCGTTC-ATCATCCAAT-TGTTTACCAGCAAAGATTAA-TCTC-TGTTGAT 192421
||| | || || | ||| ||||| |||||||||||||| | ||| | | || || |
Sbjct 277225 AGAAAGGGTACGGCCCATCCTCCAAACTGTTTACCAGCAAAAAATAAGACGCTTGCTGGT 277284
Query 192422 C-AGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGAC 192480
| ||||| | |||||| ||||| || || || || ||||| |||| |||||
Sbjct 277285 CTGGGTGGGA-TCCTTCCTTATCCTGGATCTTGGCCTTCACATTTTCAATAGTGTCTGAA 277343
Query 192481 GATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
| || || || ||||| ||||| || ||||| | || || | ||| ||||||||
Sbjct 277344 GGCTCCACCTCGAGAGTGATGGTCTTGCCAGTAAGAGTCTTGACAAAAATCTGCAT 277399
>seq463
Length=112955
Score = 87.8 bits (96), Expect = 4e-12
Identities = 136/193 (70%), Gaps = 1/193 (1%)
Strand=Plus/Minus
Query 192347 CTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGA 192406
|||| || || || ||||| || | ||| | | |||| || | |||||| || |||||||
Sbjct 58490 CTTTTGA-ATGTTGTAATCGGAGAGTGTCCTTCCATCCTCGAGTTGTTTTCCGGCAAAGA 58432
Query 192407 TTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAG 192466
| || | ||| ||||| || || ||||| || || || || || || || |||||
Sbjct 58431 TCAACCGCTGCTGATCCGGGGGGATTCCCTCCTTGTCCTGGATCTTGGCCTTGACATTCT 58372
Query 192467 TTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAA 192526
|| | || | ||| || || || || ||||||||||| || | ||||||| |
Sbjct 58371 CGATCGTGTCACTGGGTTCCACCTCAAGCGTGATGGTTTTACCCGTGAGGGTTTTAACGA 58312
Query 192527 ATATCTGCATTTT 192539
| |||||||||||
Sbjct 58311 AAATCTGCATTTT 58299
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984361406462700
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