Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02] 9,402 sequences; 286,766,519 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq752 87.8 5e-12 >seq752 Length=77004 Score = 87.8 bits (96), Expect = 5e-12 Identities = 103/139 (74%), Gaps = 3/139 (2%) Strand=Plus/Plus Query 301815 AATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCAAA 301874 |||||| | | |||||| |||||| | |||||||| |||||| | ||||||||||| Sbjct 40865 AATTTCCTTCAGACGGGGTACACCAAGCGTTACGTT---CTTGGATGATACACCAGCAAA 40921 Query 301875 GTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATCAT 301934 ||| ||||| ||||| || | |||||| | || || || | | || || || || Sbjct 40922 GTGAAAAGTGTTCAGTGTCATTTGAGTTGCAGGTTCTCCGAGAGACTGGGCAGCCATTGC 40981 Query 301935 ACCAACCATTTCTCCTGGT 301953 |||||||||||| || ||| Sbjct 40982 ACCAACCATTTCGCCAGGT 41000 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471640300252474