Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02]
9,402 sequences; 286,766,519 total letters
Query= NC_024450.1
Length=204054
Score E
Sequences producing significant alignments: (Bits) Value
seq248 96.9 5e-15
seq2157 95.1 2e-14
seq571 95.1 2e-14
seq2337 91.5 2e-13
seq1282 91.5 2e-13
seq24 84.2 3e-11
seq2350 82.4 1e-10
>seq248
Length=162157
Score = 96.9 bits (106), Expect = 5e-15
Identities = 65/73 (89%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716
||||||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||
Sbjct 136141 TTCCTCGATAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 136200
Query 8717 CCCCGACGAGGAG 8729
||||| || ||||
Sbjct 136201 CCCCGTCGGGGAG 136213
Score = 91.5 bits (100), Expect = 2e-13
Identities = 64/72 (89%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 136142 TCCTCGATAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 136201
Query 11789 CCCGACGAGGAG 11800
|||| || ||||
Sbjct 136202 CCCGTCGGGGAG 136213
Score = 86.0 bits (94), Expect = 8e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 136213 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 136154
Query 139413 TACTAACGAGGA 139424
||||| ||||||
Sbjct 136153 TACTATCGAGGA 136142
>seq2157
Length=30512
Score = 95.1 bits (104), Expect = 2e-14
Identities = 66/75 (88%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 8655 TATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 8714
|| |||||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||
Sbjct 22420 TACTCCTCGATAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 22361
Query 8715 TTCCCCGACGAGGAG 8729
||||||| || ||||
Sbjct 22360 TTCCCCGTCGGGGAG 22346
Score = 91.5 bits (100), Expect = 2e-13
Identities = 64/72 (89%), Gaps = 1/72 (1%)
Strand=Plus/Minus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 22417 TCCTCGATAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 22358
Query 11789 CCCGACGAGGAG 11800
|||| || ||||
Sbjct 22357 CCCGTCGGGGAG 22346
Score = 91.5 bits (100), Expect = 2e-13
Identities = 64/72 (89%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 24572 TCCTCGATAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 24631
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 24632 CCCGTCG-GGAG 24642
Score = 87.8 bits (96), Expect = 2e-12
Identities = 64/72 (89%), Gaps = 2/72 (3%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 24572 TCCTCGATAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 24631
Query 11789 CCCGACGAGGAG 11800
|||| || ||||
Sbjct 24632 CCCGTCG-GGAG 24642
Score = 86.0 bits (94), Expect = 8e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 22346 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 22405
Query 139413 TACTAACGAGGA 139424
||||| ||||||
Sbjct 22406 TACTATCGAGGA 22417
Score = 82.4 bits (90), Expect = 1e-10
Identities = 62/72 (86%), Gaps = 1/72 (1%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 24642 CTCC-CGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 24584
Query 139413 TACTAACGAGGA 139424
||||| ||||||
Sbjct 24583 TACTATCGAGGA 24572
>seq571
Length=97103
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 77305 TCCTCGATAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 77364
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 77365 CCCGTCGGGGAG 77376
Score = 91.5 bits (100), Expect = 2e-13
Identities = 66/75 (88%), Gaps = 1/75 (1%)
Strand=Plus/Plus
Query 11727 CAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 11785
|| |||||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||
Sbjct 77302 CACTCCTCGATAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 77361
Query 11786 TTCCCCGACGAGGAG 11800
||||||| || ||||
Sbjct 77362 TTCCCCGTCGGGGAG 77376
Score = 86.0 bits (94), Expect = 8e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 77376 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 77317
Query 139413 TACTAACGAGGA 139424
||||| ||||||
Sbjct 77316 TACTATCGAGGA 77305
>seq2337
Length=28304
Score = 91.5 bits (100), Expect = 2e-13
Identities = 64/72 (89%), Gaps = 1/72 (1%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 20622 TCCTCGATAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 20563
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 20562 CCCGTCG-GGAG 20552
Score = 87.8 bits (96), Expect = 2e-12
Identities = 64/72 (89%), Gaps = 2/72 (3%)
Strand=Plus/Minus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 20622 TCCTCGATAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 20563
Query 11789 CCCGACGAGGAG 11800
|||| || ||||
Sbjct 20562 CCCGTCG-GGAG 20552
Score = 82.4 bits (90), Expect = 1e-10
Identities = 62/72 (86%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 20552 CTCC-CGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 20610
Query 139413 TACTAACGAGGA 139424
||||| ||||||
Sbjct 20611 TACTATCGAGGA 20622
>seq1282
Length=50195
Score = 91.5 bits (100), Expect = 2e-13
Identities = 64/72 (89%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 24901 TCCTCGATAGTATAGTGGTGAGTATCCCCG-CTGTCACGCGGGAGACCGGGGTTCGATTC 24959
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 24960 CCCGTCGGGGAG 24971
Score = 87.8 bits (96), Expect = 2e-12
Identities = 64/72 (89%), Gaps = 2/72 (3%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 24901 TCCTCGATAGTATAGTGGTGAGTATCCCCG-CTGTCACGCGGGAGACCGGGGTTCGATTC 24959
Query 11789 CCCGACGAGGAG 11800
|||| || ||||
Sbjct 24960 CCCGTCGGGGAG 24971
Score = 82.4 bits (90), Expect = 1e-10
Identities = 62/72 (86%), Gaps = 1/72 (1%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | ||| | |||||||| | |||||||
Sbjct 24971 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGAC-AGCGGGGATACTCACCACTA 24913
Query 139413 TACTAACGAGGA 139424
||||| ||||||
Sbjct 24912 TACTATCGAGGA 24901
>seq24
Length=477709
Score = 84.2 bits (92), Expect = 3e-11
Identities = 57/64 (89%), Gaps = 0/64 (0%)
Strand=Plus/Plus
Query 8667 GTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCCCGACGAG 8726
|||||||||| ||||| |||| ||||| | ||||||||||||||||||||||||| || |
Sbjct 462205 GTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGTCGGG 462264
Query 8727 GAGC 8730
||||
Sbjct 462265 GAGC 462268
>seq2350
Length=28118
Score = 82.4 bits (90), Expect = 1e-10
Identities = 64/74 (86%), Gaps = 2/74 (3%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCAC-GGGAGACC-GGGGTTCGAT 8715
|||||| |||||||||||| ||||| |||| ||||| | | |||||||| ||||||||||
Sbjct 17267 TCCTCGATAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGGAGACCGGGGGTTCGAT 17326
Query 8716 TCCCCGACGAGGAG 8729
|||||| || ||||
Sbjct 17327 TCCCCGTCGGGGAG 17340
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 652768074414880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |