Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02] 9,402 sequences; 286,766,519 total letters Query= NC_024450.1 Length=204054 Score E Sequences producing significant alignments: (Bits) Value seq248 96.9 5e-15 seq2157 95.1 2e-14 seq571 95.1 2e-14 seq2337 91.5 2e-13 seq1282 91.5 2e-13 seq24 84.2 3e-11 seq2350 82.4 1e-10 >seq248 Length=162157 Score = 96.9 bits (106), Expect = 5e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 ||||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||| Sbjct 136141 TTCCTCGATAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 136200 Query 8717 CCCCGACGAGGAG 8729 ||||| || |||| Sbjct 136201 CCCCGTCGGGGAG 136213 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/72 (89%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 136142 TCCTCGATAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 136201 Query 11789 CCCGACGAGGAG 11800 |||| || |||| Sbjct 136202 CCCGTCGGGGAG 136213 Score = 86.0 bits (94), Expect = 8e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| || |||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 136213 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 136154 Query 139413 TACTAACGAGGA 139424 ||||| |||||| Sbjct 136153 TACTATCGAGGA 136142 >seq2157 Length=30512 Score = 95.1 bits (104), Expect = 2e-14 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 8655 TATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 8714 || |||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||| Sbjct 22420 TACTCCTCGATAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 22361 Query 8715 TTCCCCGACGAGGAG 8729 ||||||| || |||| Sbjct 22360 TTCCCCGTCGGGGAG 22346 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/72 (89%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 22417 TCCTCGATAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 22358 Query 11789 CCCGACGAGGAG 11800 |||| || |||| Sbjct 22357 CCCGTCGGGGAG 22346 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/72 (89%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 24572 TCCTCGATAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 24631 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 24632 CCCGTCG-GGAG 24642 Score = 87.8 bits (96), Expect = 2e-12 Identities = 64/72 (89%), Gaps = 2/72 (3%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 24572 TCCTCGATAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 24631 Query 11789 CCCGACGAGGAG 11800 |||| || |||| Sbjct 24632 CCCGTCG-GGAG 24642 Score = 86.0 bits (94), Expect = 8e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| || |||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 22346 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 22405 Query 139413 TACTAACGAGGA 139424 ||||| |||||| Sbjct 22406 TACTATCGAGGA 22417 Score = 82.4 bits (90), Expect = 1e-10 Identities = 62/72 (86%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| || |||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 24642 CTCC-CGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 24584 Query 139413 TACTAACGAGGA 139424 ||||| |||||| Sbjct 24583 TACTATCGAGGA 24572 >seq571 Length=97103 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 77305 TCCTCGATAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 77364 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 77365 CCCGTCGGGGAG 77376 Score = 91.5 bits (100), Expect = 2e-13 Identities = 66/75 (88%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 11727 CAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 11785 || |||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||| Sbjct 77302 CACTCCTCGATAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 77361 Query 11786 TTCCCCGACGAGGAG 11800 ||||||| || |||| Sbjct 77362 TTCCCCGTCGGGGAG 77376 Score = 86.0 bits (94), Expect = 8e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| || |||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 77376 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 77317 Query 139413 TACTAACGAGGA 139424 ||||| |||||| Sbjct 77316 TACTATCGAGGA 77305 >seq2337 Length=28304 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/72 (89%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 20622 TCCTCGATAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 20563 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 20562 CCCGTCG-GGAG 20552 Score = 87.8 bits (96), Expect = 2e-12 Identities = 64/72 (89%), Gaps = 2/72 (3%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 20622 TCCTCGATAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 20563 Query 11789 CCCGACGAGGAG 11800 |||| || |||| Sbjct 20562 CCCGTCG-GGAG 20552 Score = 82.4 bits (90), Expect = 1e-10 Identities = 62/72 (86%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| || |||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 20552 CTCC-CGACGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 20610 Query 139413 TACTAACGAGGA 139424 ||||| |||||| Sbjct 20611 TACTATCGAGGA 20622 >seq1282 Length=50195 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/72 (89%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 24901 TCCTCGATAGTATAGTGGTGAGTATCCCCG-CTGTCACGCGGGAGACCGGGGTTCGATTC 24959 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 24960 CCCGTCGGGGAG 24971 Score = 87.8 bits (96), Expect = 2e-12 Identities = 64/72 (89%), Gaps = 2/72 (3%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 24901 TCCTCGATAGTATAGTGGTGAGTATCCCCG-CTGTCACGCGGGAGACCGGGGTTCGATTC 24959 Query 11789 CCCGACGAGGAG 11800 |||| || |||| Sbjct 24960 CCCGTCGGGGAG 24971 Score = 82.4 bits (90), Expect = 1e-10 Identities = 62/72 (86%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| || |||||| |||||||||||||||||| | ||| | |||||||| | ||||||| Sbjct 24971 CTCCCCGACGGGGAATCGAACCCCGGTCTCCCGCGTGAC-AGCGGGGATACTCACCACTA 24913 Query 139413 TACTAACGAGGA 139424 ||||| |||||| Sbjct 24912 TACTATCGAGGA 24901 >seq24 Length=477709 Score = 84.2 bits (92), Expect = 3e-11 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 8667 GTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTCCCCGACGAG 8726 |||||||||| ||||| |||| ||||| | ||||||||||||||||||||||||| || | Sbjct 462205 GTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGTCGGG 462264 Query 8727 GAGC 8730 |||| Sbjct 462265 GAGC 462268 >seq2350 Length=28118 Score = 82.4 bits (90), Expect = 1e-10 Identities = 64/74 (86%), Gaps = 2/74 (3%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCAC-GGGAGACC-GGGGTTCGAT 8715 |||||| |||||||||||| ||||| |||| ||||| | | |||||||| |||||||||| Sbjct 17267 TCCTCGATAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGGAGACCGGGGGTTCGAT 17326 Query 8716 TCCCCGACGAGGAG 8729 |||||| || |||| Sbjct 17327 TCCCCGTCGGGGAG 17340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 652768074414880