Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02] 9,402 sequences; 286,766,519 total letters Query= NC_024451.1 Length=220222 Score E Sequences producing significant alignments: (Bits) Value seq6404 87.8 3e-12 >seq6404 Length=9468 Score = 87.8 bits (96), Expect = 3e-12 Identities = 134/189 (71%), Gaps = 8/189 (4%) Strand=Plus/Plus Query 140436 AATATTGTTCACCGAGACATTAAACTCGGAAACATCATTTATGACACAAAGTTA----AA 140491 |||||||| || || ||| | ||||| || |||||||| | | | || | || | Sbjct 7020 AATATTGTACATCGGGACCTGAAACTTGGTAACATCATCTT--AAATAAGGATACTGGAG 7077 Query 140492 AACTAGTAAACTATCTAATTTTTGTTTAGGAAAACACCTTTCAAGTGAAAACGATCTTTT 140551 || | || ||| ||||||||||| | |||||||| || | ||||| || ||||| | Sbjct 7078 AAGT--TACTCTAGCTAATTTTTGTCTGGGAAAACATCTGACTAGTGATAATGATCTCCT 7135 Query 140552 AAAAGATCAACGCGGGTCTCCCGCATATATTTCTCCGGATGTTATCAGCGGTAAACCATA 140611 || ||||| | || || || || || ||||| || ||||| || | || || ||||| Sbjct 7136 GAAGGATCAGAGGGGCTCGCCAGCCTACATTTCACCCGATGTCATAATTGGGAAGCCATA 7195 Query 140612 TTTAGGTAA 140620 |||||||| Sbjct 7196 CTTAGGTAA 7204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 704499593953440