Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02]
9,402 sequences; 286,766,519 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq463 109 5e-19
seq159 107 2e-18
seq47 107 2e-18
>seq463
Length=112955
Score = 109 bits (120), Expect = 5e-19
Identities = 117/155 (75%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565
|||||||| || || || || | || | ||||||||| || || ||||| || ||||||
Sbjct 58456 TCCTCGAGTTGTTTTCCGGCAAAGATCAACCGCTGCTGATCCGGGGGGATTCCCTCCTTG 58397
Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625
|| |||||| ||||| | ||| | |||||| |||| ||||| || | |||| |
Sbjct 58396 TCCTGGATCTTGGCCTTGACATTCTCGATCGTGTCACTGGGTTCCACCTCAAGCGTGATG 58337
Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660
||||| || || || ||||| ||||||||||||||
Sbjct 58336 GTTTTACCCGTGAGGGTTTTAACGAAAATCTGCAT 58302
>seq159
Length=219009
Score = 107 bits (118), Expect = 2e-18
Identities = 112/147 (76%), Gaps = 0/147 (0%)
Strand=Plus/Minus
Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574
|| ||||| || | || || ||||||||||| || || |||||||||||||| ||||
Sbjct 159165 TGTTTGCCAGCAAAGATAAGACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCTTGGATC 159106
Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634
|| ||||| | ||| | |||||| |||| || || || | ||||| ||| || ||
Sbjct 159105 TTGGCCTTGACATTCTCGATCGTGTCACTGGGTTCTACCTCTAAGGTGATGGTCTTTCCA 159046
Query 133635 GTCAGAGTTTTTACGAAAATCTGCATG 133661
|||| |||||| ||||| |||||||||
Sbjct 159045 GTCAAAGTTTTGACGAAGATCTGCATG 159019
Score = 104 bits (114), Expect = 2e-17
Identities = 144/199 (72%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|||||||| || || || ||||| |||| | || | | | ||||| || ||||| ||
Sbjct 157756 GTGGACTCCTTTTGGATGTTGTAGTCGCTGAGGGTACGGCCA-TCCTCAAGTTGCTTTCC 157698
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| | || | ||||||||||| || || |||||||||||||| |||||| |||
Sbjct 157697 AGCAAAGATCAAACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCTTGGATCTTAGCCTT 157638
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | |||| ||||| | |||||||| || | ||||| || || || |||| |||
Sbjct 157637 GACATTTTCAATGGTGTCAGAAGGCTCCACCTCAAGGGTGATCGTCTTTCCAGTCAAAGT 157578
Query 133643 TTTTACGAAAATCTGCATG 133661
|| || || |||||||||
Sbjct 157577 CTTGACAAAGATCTGCATG 157559
Score = 102 bits (112), Expect = 8e-17
Identities = 145/200 (73%), Gaps = 3/200 (2%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|||||||| || || || ||||| |||| | || | | | ||||| || ||||| ||
Sbjct 159445 GTGGACTCCTTTTGGATGTTGTAGTCGCTGAGGGTTCGGCCA-TCCTCAAGTTGCTTTCC 159387
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| | || | ||||||||||| || || |||||||||||||| |||||| |||
Sbjct 159386 AGCAAAGATCAAACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCTTGGATCTTAGCCTT 159327
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGA-CGGTTTTGCCGGTCAGAG 133641
|| | |||| ||||| | |||||||| || | ||||| || ||| || |||| ||
Sbjct 159326 GACATTTTCAATGGTGTCAGAAGGCTCCACCTCAAGGGTGATCGTCTTTTCCAGTCAAAG 159267
Query 133642 TTTTTACGAAAATCTGCATG 133661
| || || || |||||||||
Sbjct 159266 TCTTGACAAAGATCTGCATG 159247
Score = 98.7 bits (108), Expect = 1e-15
Identities = 142/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGT-GGACGAGTCCTCGAGCTGCTTGCC 133522
|| || || ||||| ||||||||||| | || | | | ||||| | ||| || ||
Sbjct 159901 GTCGATTCCTTCTGAATATTGTAATCAGAGAGAGTACGTCCA-TCCTCCAACTGTTTACC 159843
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| |||| || ||||| ||||| || || || |||||||| || |||||| |||
Sbjct 159842 AGCAAAAATAAGACGCTGTTGGTCTGGGGGAATACCTTCCTTATCTTGGATCTTGGCCTT 159783
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
|| | ||| | ||||||| |||| || || || | |||| ||| || || |||| |||
Sbjct 159782 GACATTCTCGATCGTGTCGCTGGGTTCTACCTCCAAAGTGATGGTCTTTCCAGTCAAAGT 159723
Query 133643 TTTTACGAAAATCTGCAT 133660
|| ||||| ||||||||
Sbjct 159722 CTTGACGAAGATCTGCAT 159705
Score = 95.1 bits (104), Expect = 1e-14
Identities = 142/199 (71%), Gaps = 2/199 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|| || || || || |||||||| |||| | ||| ||| | || || | |||||| ||
Sbjct 157528 GTAGATTCCTTTTGGATATTGTAGTCGCTGAGGGTGCGACCA-TCTTCCAACTGCTTTCC 157470
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| | ||||| || || || || || || ||||||||||| || |||||| |||
Sbjct 157469 AGCAAAGATGAGACGTTGTTGATCTGGGGGAATGCCTTCCTTATCTTGAATCTTTGCCTT 157410
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| | || | ||||| | |||||||| || | ||||| || ||||| || || ||
Sbjct 157409 CACATTTTCGATAGTGTCAGAAGGCTCCACCTCAAGGGTGATCGTCTTGCCAGTGAGTGT 157350
Query 133643 TTTTACGAAAATCTGCATG 133661
|| |||||||||||||||
Sbjct 157349 CTTCACGAAAATCTGCATG 157331
Score = 93.3 bits (102), Expect = 4e-14
Identities = 141/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|| || || || || |||||||| |||| | ||| ||| | || || | |||||| ||
Sbjct 158988 GTAGATTCCTTTTGGATATTGTAGTCGCTGAGGGTGCGACCA-TCTTCCAACTGCTTTCC 158930
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
|| | ||||| ||||| || || || || ||||||||||| || ||||| |||
Sbjct 158929 AGCAAAGATGAGACGCTGTTGATCTGGGGGAATGCCTTCCTTATCTTGAATCTTGGCCTT 158870
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642
| | || | ||||||| |||||||| || | |||| ||||||||| || || ||
Sbjct 158869 AACATTTTCGATGGTGTCGGAAGGCTCCACCTCAAGAGTGATGGTTTTGCCAGTAAGGGT 158810
Query 133643 TTTTACGAAAATCTGCAT 133660
|| || ||||| |||||
Sbjct 158809 CTTGACAAAAATTTGCAT 158792
Score = 93.3 bits (102), Expect = 4e-14
Identities = 145/205 (71%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515
||| | ||||||||| ||||| |||||||| |||| | || | | | ||||| || |
Sbjct 159680 ATGAAGGGTGGACTCCTTCTGGATATTGTAGTCGCTGAGGGTACGGCCA-TCCTCAAGTT 159622
Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575
|||| || || | || | ||||| ||||| || ||||| ||||||||||| ||||
Sbjct 159621 GCTTTCCAGCAAAGATCAAACGCTGTTGGTCTGGGGGGATTCCTTCCTTGTCTTGAATCT 159562
Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635
| ||| | | || | ||||| | ||| ||||| || | |||| || || || |
Sbjct 159561 TGGCCTTAACGTTTTCGATAGTGTCAGAGGGTTCCACCTCCAATGTGATAGTCTTTCCTG 159502
Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660
| || || || ||||| ||||||||
Sbjct 159501 TAAGCGTCTTAACGAAGATCTGCAT 159477
>seq47
Length=390960
Score = 107 bits (118), Expect = 2e-18
Identities = 150/205 (73%), Gaps = 4/205 (2%)
Strand=Plus/Plus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515
||| | ||| ||||| || || || |||||||| | ||| ||| | ||||| | ||
Sbjct 276503 ATGAAGGGTAGACTCCTTTTGAATGTTGTAATCAGAAAGGGTGCGACCA-TCCTCCAACT 276561
Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575
|||| || || |||| || ||||||||||| || ||||| || ||||| || |||||
Sbjct 276562 GCTTTCCAGCAAAAATAAGACGCTGCTGGTCTGGTGGGATTCCCTCCTTATCTTGGATCT 276621
Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635
| ||||| | |||| ||||| |||| ||||| |||| |||| ||| ||||| |
Sbjct 276622 TAGCCTTGACATTTTCAATGGTGTCACTGGGTTCCACCTCGAGAGTGATGGTCTTGCCAG 276681
Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660
| ||||| || || ||||| |||||
Sbjct 276682 TAAGAGTCTTGAC-AAAAT-TGCAT 276704
Score = 105 bits (116), Expect = 6e-18
Identities = 148/205 (72%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515
||| | ||| ||||| || || || |||||||| | || | | | ||||| | ||
Sbjct 276730 ATGAAGGGTAGACTCCTTTTGAATGTTGTAATCAGAAAGGGTACGGCCA-TCCTCCAACT 276788
Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575
| || || || |||| || ||||||||||| || ||||| |||||||| || |||||
Sbjct 276789 GTTTACCAGCAAAAATAAGACGCTGCTGGTCTGGTGGGATCCCTTCCTTATCCTGGATCT 276848
Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635
| ||| | | |||| ||||| |||| ||||| |||| |||| ||| ||||| |
Sbjct 276849 TGGCCTTCACATTTTCAATGGTGTCACTGGGTTCCACCTCGAGAGTGATGGTCTTGCCAG 276908
Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660
| ||||| || || |||||||||||
Sbjct 276909 TAAGAGTCTTGACAAAAATCTGCAT 276933
Score = 100 bits (110), Expect = 3e-16
Identities = 148/206 (72%), Gaps = 3/206 (1%)
Strand=Plus/Plus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515
||| | ||| ||||| || || || |||||||| | || | | | ||||| | ||
Sbjct 276274 ATGAAGGGTAGACTCCTTTTGAATGTTGTAATCAGAAAGGGTACGGCCA-TCCTCCAACT 276332
Query 133516 GCTTGCCC-GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574
| || || || |||| || ||||||||||| || ||||| |||||||| || ||||
Sbjct 276333 GTTTTACCAGCAAAAATAAGACGCTGCTGGTCTGGTGGGATCCCTTCCTTATCCTGGATC 276392
Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634
|| ||| | | |||| ||||| |||| ||||| |||| |||| ||| |||||
Sbjct 276393 TTGGCCTTCACATTTTCAATGGTGTCACTGGGTTCCACCTCGAGAGTGATGGTCTTGCCA 276452
Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660
|| ||||| || || |||||||||||
Sbjct 276453 GTAAGAGTCTTGACAAAAATCTGCAT 276478
Score = 95.1 bits (104), Expect = 1e-14
Identities = 148/207 (71%), Gaps = 6/207 (3%)
Strand=Plus/Plus
Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTC--CTCGAGC 133514
||| | ||| ||||| || || || |||||||| | ||| ||| | | ||| | |
Sbjct 277653 ATGAAGGGTAGACTCCTTTTGAATGTTGTAATCAGAAAGCGT--ACG-GCCATCTCCAAC 277709
Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574
|| || | || | || || ||||||||||| || ||||| |||||||| || ||||
Sbjct 277710 TGTTTTCA-GCAAAGATAAGACGCTGCTGGTCTGGTGGGATCCCTTCCTTATCCTGGATC 277768
Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634
|| ||| | | |||| ||||||| |||||||| |||| |||| ||| |||||
Sbjct 277769 TTGGCCTTCACATTTTCAATAGTGTCGGAAGGCTCCACCTCGAGAGTGATGGTCTTGCCA 277828
Query 133635 GTCAGAGTTTTTACGAAAATCTGCATG 133661
|| || || || |||||||| ||||||
Sbjct 277829 GTGAGTGTCTTCACGAAAATTTGCATG 277855
Score = 86.0 bits (94), Expect = 6e-12
Identities = 100/134 (75%), Gaps = 1/134 (1%)
Strand=Plus/Plus
Query 133528 AAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTC-GGTGATCTTTTGCTTGAGC 133586
|||| || ||||||||||| || ||||| || ||||| || | ||||| |||||
Sbjct 277034 AAATAAGACGCTGCTGGTCTGGTGGGATTCCCTCCTTATCTTGGAATCTTAGCCTTGACA 277093
Query 133587 TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTT 133646
| |||| ||||| |||| ||||| |||| |||| ||| ||||| || ||||| ||
Sbjct 277094 TTTTCAATGGTGTCACTGGGTTCCACCTCGAGAGTGATGGTCTTGCCAGTAAGAGTCTTG 277153
Query 133647 ACGAAAATCTGCAT 133660
|| ||||| |||||
Sbjct 277154 ACAAAAATTTGCAT 277167
Score = 84.2 bits (92), Expect = 2e-11
Identities = 99/133 (74%), Gaps = 1/133 (1%)
Strand=Plus/Plus
Query 133528 AAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCT 133587
|||| || ||||||||||| || || || |||||||| || |||||| || | |
Sbjct 276118 AAATAAGACGCTGCTGGTCTGGTGG-ATCCCTTCCTTATCCTGGATCTTGCCTTTCACAT 276176
Query 133588 GCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTA 133647
|||| ||||| | |||||||| |||| |||| ||| ||||| || ||||| || |
Sbjct 276177 TTTCAATAGTGTCTGAAGGCTCCACCTCGAGAGTGATGGTCTTGCCAGTAAGAGTCTTGA 276236
Query 133648 CGAAAATCTGCAT 133660
| |||||||||||
Sbjct 276237 CAAAAATCTGCAT 276249
Score = 84.2 bits (92), Expect = 2e-11
Identities = 102/135 (76%), Gaps = 3/135 (2%)
Strand=Plus/Plus
Query 133528 AAATGAGCCGCT-GCTGGTC-GGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAG 133585
|||| || |||| ||||||| ||| ||||| |||||||| || |||||| ||| |
Sbjct 277266 AAATAAGACGCTTGCTGGTCTGGGTGGGAT-CCTTCCTTATCCTGGATCTTGGCCTTCAC 277324
Query 133586 CTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTT 133645
| |||| ||||| | |||||||| |||| |||| ||| ||||| || ||||| ||
Sbjct 277325 ATTTTCAATAGTGTCTGAAGGCTCCACCTCGAGAGTGATGGTCTTGCCAGTAAGAGTCTT 277384
Query 133646 TACGAAAATCTGCAT 133660
|| |||||||||||
Sbjct 277385 GACAAAAATCTGCAT 277399
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483363985970480
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