Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02] 9,402 sequences; 286,766,519 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq463 109 5e-19 seq159 107 2e-18 seq47 107 2e-18 >seq463 Length=112955 Score = 109 bits (120), Expect = 5e-19 Identities = 117/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 |||||||| || || || || | || | ||||||||| || || ||||| || |||||| Sbjct 58456 TCCTCGAGTTGTTTTCCGGCAAAGATCAACCGCTGCTGATCCGGGGGGATTCCCTCCTTG 58397 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||||| | ||| | |||||| |||| ||||| || | |||| | Sbjct 58396 TCCTGGATCTTGGCCTTGACATTCTCGATCGTGTCACTGGGTTCCACCTCAAGCGTGATG 58337 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||||| || || || ||||| |||||||||||||| Sbjct 58336 GTTTTACCCGTGAGGGTTTTAACGAAAATCTGCAT 58302 >seq159 Length=219009 Score = 107 bits (118), Expect = 2e-18 Identities = 112/147 (76%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 || ||||| || | || || ||||||||||| || || |||||||||||||| |||| Sbjct 159165 TGTTTGCCAGCAAAGATAAGACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCTTGGATC 159106 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||||| | ||| | |||||| |||| || || || | ||||| ||| || || Sbjct 159105 TTGGCCTTGACATTCTCGATCGTGTCACTGGGTTCTACCTCTAAGGTGATGGTCTTTCCA 159046 Query 133635 GTCAGAGTTTTTACGAAAATCTGCATG 133661 |||| |||||| ||||| ||||||||| Sbjct 159045 GTCAAAGTTTTGACGAAGATCTGCATG 159019 Score = 104 bits (114), Expect = 2e-17 Identities = 144/199 (72%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||| || || || ||||| |||| | || | | | ||||| || ||||| || Sbjct 157756 GTGGACTCCTTTTGGATGTTGTAGTCGCTGAGGGTACGGCCA-TCCTCAAGTTGCTTTCC 157698 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || | ||||||||||| || || |||||||||||||| |||||| ||| Sbjct 157697 AGCAAAGATCAAACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCTTGGATCTTAGCCTT 157638 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | |||| ||||| | |||||||| || | ||||| || || || |||| ||| Sbjct 157637 GACATTTTCAATGGTGTCAGAAGGCTCCACCTCAAGGGTGATCGTCTTTCCAGTCAAAGT 157578 Query 133643 TTTTACGAAAATCTGCATG 133661 || || || ||||||||| Sbjct 157577 CTTGACAAAGATCTGCATG 157559 Score = 102 bits (112), Expect = 8e-17 Identities = 145/200 (73%), Gaps = 3/200 (2%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||| || || || ||||| |||| | || | | | ||||| || ||||| || Sbjct 159445 GTGGACTCCTTTTGGATGTTGTAGTCGCTGAGGGTTCGGCCA-TCCTCAAGTTGCTTTCC 159387 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || | ||||||||||| || || |||||||||||||| |||||| ||| Sbjct 159386 AGCAAAGATCAAACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCTTGGATCTTAGCCTT 159327 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGA-CGGTTTTGCCGGTCAGAG 133641 || | |||| ||||| | |||||||| || | ||||| || ||| || |||| || Sbjct 159326 GACATTTTCAATGGTGTCAGAAGGCTCCACCTCAAGGGTGATCGTCTTTTCCAGTCAAAG 159267 Query 133642 TTTTTACGAAAATCTGCATG 133661 | || || || ||||||||| Sbjct 159266 TCTTGACAAAGATCTGCATG 159247 Score = 98.7 bits (108), Expect = 1e-15 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGT-GGACGAGTCCTCGAGCTGCTTGCC 133522 || || || ||||| ||||||||||| | || | | | ||||| | ||| || || Sbjct 159901 GTCGATTCCTTCTGAATATTGTAATCAGAGAGAGTACGTCCA-TCCTCCAACTGTTTACC 159843 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || |||| || ||||| ||||| || || || |||||||| || |||||| ||| Sbjct 159842 AGCAAAAATAAGACGCTGTTGGTCTGGGGGAATACCTTCCTTATCTTGGATCTTGGCCTT 159783 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | ||| | ||||||| |||| || || || | |||| ||| || || |||| ||| Sbjct 159782 GACATTCTCGATCGTGTCGCTGGGTTCTACCTCCAAAGTGATGGTCTTTCCAGTCAAAGT 159723 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 159722 CTTGACGAAGATCTGCAT 159705 Score = 95.1 bits (104), Expect = 1e-14 Identities = 142/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || || || || |||||||| |||| | ||| ||| | || || | |||||| || Sbjct 157528 GTAGATTCCTTTTGGATATTGTAGTCGCTGAGGGTGCGACCA-TCTTCCAACTGCTTTCC 157470 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | ||||| || || || || || || ||||||||||| || |||||| ||| Sbjct 157469 AGCAAAGATGAGACGTTGTTGATCTGGGGGAATGCCTTCCTTATCTTGAATCTTTGCCTT 157410 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | ||||| | |||||||| || | ||||| || ||||| || || || Sbjct 157409 CACATTTTCGATAGTGTCAGAAGGCTCCACCTCAAGGGTGATCGTCTTGCCAGTGAGTGT 157350 Query 133643 TTTTACGAAAATCTGCATG 133661 || ||||||||||||||| Sbjct 157349 CTTCACGAAAATCTGCATG 157331 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || || || || |||||||| |||| | ||| ||| | || || | |||||| || Sbjct 158988 GTAGATTCCTTTTGGATATTGTAGTCGCTGAGGGTGCGACCA-TCTTCCAACTGCTTTCC 158930 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | ||||| ||||| || || || || ||||||||||| || ||||| ||| Sbjct 158929 AGCAAAGATGAGACGCTGTTGATCTGGGGGAATGCCTTCCTTATCTTGAATCTTGGCCTT 158870 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | ||||||| |||||||| || | |||| ||||||||| || || || Sbjct 158869 AACATTTTCGATGGTGTCGGAAGGCTCCACCTCAAGAGTGATGGTTTTGCCAGTAAGGGT 158810 Query 133643 TTTTACGAAAATCTGCAT 133660 || || ||||| ||||| Sbjct 158809 CTTGACAAAAATTTGCAT 158792 Score = 93.3 bits (102), Expect = 4e-14 Identities = 145/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||||||||| ||||| |||||||| |||| | || | | | ||||| || | Sbjct 159680 ATGAAGGGTGGACTCCTTCTGGATATTGTAGTCGCTGAGGGTACGGCCA-TCCTCAAGTT 159622 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 |||| || || | || | ||||| ||||| || ||||| ||||||||||| |||| Sbjct 159621 GCTTTCCAGCAAAGATCAAACGCTGTTGGTCTGGGGGGATTCCTTCCTTGTCTTGAATCT 159562 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||| | | || | ||||| | ||| ||||| || | |||| || || || | Sbjct 159561 TGGCCTTAACGTTTTCGATAGTGTCAGAGGGTTCCACCTCCAATGTGATAGTCTTTCCTG 159502 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 | || || || ||||| |||||||| Sbjct 159501 TAAGCGTCTTAACGAAGATCTGCAT 159477 >seq47 Length=390960 Score = 107 bits (118), Expect = 2e-18 Identities = 150/205 (73%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||| ||||| || || || |||||||| | ||| ||| | ||||| | || Sbjct 276503 ATGAAGGGTAGACTCCTTTTGAATGTTGTAATCAGAAAGGGTGCGACCA-TCCTCCAACT 276561 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 |||| || || |||| || ||||||||||| || ||||| || ||||| || ||||| Sbjct 276562 GCTTTCCAGCAAAAATAAGACGCTGCTGGTCTGGTGGGATTCCCTCCTTATCTTGGATCT 276621 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||||| | |||| ||||| |||| ||||| |||| |||| ||| ||||| | Sbjct 276622 TAGCCTTGACATTTTCAATGGTGTCACTGGGTTCCACCTCGAGAGTGATGGTCTTGCCAG 276681 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 | ||||| || || ||||| ||||| Sbjct 276682 TAAGAGTCTTGAC-AAAAT-TGCAT 276704 Score = 105 bits (116), Expect = 6e-18 Identities = 148/205 (72%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||| ||||| || || || |||||||| | || | | | ||||| | || Sbjct 276730 ATGAAGGGTAGACTCCTTTTGAATGTTGTAATCAGAAAGGGTACGGCCA-TCCTCCAACT 276788 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 | || || || |||| || ||||||||||| || ||||| |||||||| || ||||| Sbjct 276789 GTTTACCAGCAAAAATAAGACGCTGCTGGTCTGGTGGGATCCCTTCCTTATCCTGGATCT 276848 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||| | | |||| ||||| |||| ||||| |||| |||| ||| ||||| | Sbjct 276849 TGGCCTTCACATTTTCAATGGTGTCACTGGGTTCCACCTCGAGAGTGATGGTCTTGCCAG 276908 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 | ||||| || || ||||||||||| Sbjct 276909 TAAGAGTCTTGACAAAAATCTGCAT 276933 Score = 100 bits (110), Expect = 3e-16 Identities = 148/206 (72%), Gaps = 3/206 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||| ||||| || || || |||||||| | || | | | ||||| | || Sbjct 276274 ATGAAGGGTAGACTCCTTTTGAATGTTGTAATCAGAAAGGGTACGGCCA-TCCTCCAACT 276332 Query 133516 GCTTGCCC-GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 | || || || |||| || ||||||||||| || ||||| |||||||| || |||| Sbjct 276333 GTTTTACCAGCAAAAATAAGACGCTGCTGGTCTGGTGGGATCCCTTCCTTATCCTGGATC 276392 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||| | | |||| ||||| |||| ||||| |||| |||| ||| ||||| Sbjct 276393 TTGGCCTTCACATTTTCAATGGTGTCACTGGGTTCCACCTCGAGAGTGATGGTCTTGCCA 276452 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 || ||||| || || ||||||||||| Sbjct 276453 GTAAGAGTCTTGACAAAAATCTGCAT 276478 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/207 (71%), Gaps = 6/207 (3%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTC--CTCGAGC 133514 ||| | ||| ||||| || || || |||||||| | ||| ||| | | ||| | | Sbjct 277653 ATGAAGGGTAGACTCCTTTTGAATGTTGTAATCAGAAAGCGT--ACG-GCCATCTCCAAC 277709 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 || || | || | || || ||||||||||| || ||||| |||||||| || |||| Sbjct 277710 TGTTTTCA-GCAAAGATAAGACGCTGCTGGTCTGGTGGGATCCCTTCCTTATCCTGGATC 277768 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||| | | |||| ||||||| |||||||| |||| |||| ||| ||||| Sbjct 277769 TTGGCCTTCACATTTTCAATAGTGTCGGAAGGCTCCACCTCGAGAGTGATGGTCTTGCCA 277828 Query 133635 GTCAGAGTTTTTACGAAAATCTGCATG 133661 || || || || |||||||| |||||| Sbjct 277829 GTGAGTGTCTTCACGAAAATTTGCATG 277855 Score = 86.0 bits (94), Expect = 6e-12 Identities = 100/134 (75%), Gaps = 1/134 (1%) Strand=Plus/Plus Query 133528 AAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTC-GGTGATCTTTTGCTTGAGC 133586 |||| || ||||||||||| || ||||| || ||||| || | ||||| ||||| Sbjct 277034 AAATAAGACGCTGCTGGTCTGGTGGGATTCCCTCCTTATCTTGGAATCTTAGCCTTGACA 277093 Query 133587 TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTT 133646 | |||| ||||| |||| ||||| |||| |||| ||| ||||| || ||||| || Sbjct 277094 TTTTCAATGGTGTCACTGGGTTCCACCTCGAGAGTGATGGTCTTGCCAGTAAGAGTCTTG 277153 Query 133647 ACGAAAATCTGCAT 133660 || ||||| ||||| Sbjct 277154 ACAAAAATTTGCAT 277167 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/133 (74%), Gaps = 1/133 (1%) Strand=Plus/Plus Query 133528 AAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCT 133587 |||| || ||||||||||| || || || |||||||| || |||||| || | | Sbjct 276118 AAATAAGACGCTGCTGGTCTGGTGG-ATCCCTTCCTTATCCTGGATCTTGCCTTTCACAT 276176 Query 133588 GCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTA 133647 |||| ||||| | |||||||| |||| |||| ||| ||||| || ||||| || | Sbjct 276177 TTTCAATAGTGTCTGAAGGCTCCACCTCGAGAGTGATGGTCTTGCCAGTAAGAGTCTTGA 276236 Query 133648 CGAAAATCTGCAT 133660 | ||||||||||| Sbjct 276237 CAAAAATCTGCAT 276249 Score = 84.2 bits (92), Expect = 2e-11 Identities = 102/135 (76%), Gaps = 3/135 (2%) Strand=Plus/Plus Query 133528 AAATGAGCCGCT-GCTGGTC-GGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAG 133585 |||| || |||| ||||||| ||| ||||| |||||||| || |||||| ||| | Sbjct 277266 AAATAAGACGCTTGCTGGTCTGGGTGGGAT-CCTTCCTTATCCTGGATCTTGGCCTTCAC 277324 Query 133586 CTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTT 133645 | |||| ||||| | |||||||| |||| |||| ||| ||||| || ||||| || Sbjct 277325 ATTTTCAATAGTGTCTGAAGGCTCCACCTCGAGAGTGATGGTCTTGCCAGTAAGAGTCTT 277384 Query 133646 TACGAAAATCTGCAT 133660 || ||||||||||| Sbjct 277385 GACAAAAATCTGCAT 277399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483363985970480