Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02] 9,402 sequences; 286,766,519 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq1326 105 2e-17 >seq1326 Length=48828 Score = 105 bits (116), Expect = 2e-17 Identities = 168/237 (71%), Gaps = 3/237 (1%) Strand=Plus/Plus Query 110743 AGAGAAATGGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCT 110802 ||||| |||| | || ||||| ||| | ||||| |||||| ||||| | |||||||| | Sbjct 33080 AGAGACCTGGCGCGTTCGCTATGTATTTGGAACCGTGGCATGCAGATGTCTTTGAATTTT 33139 Query 110803 TAGAACTTCGTAAAAATCAA-GGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCA 110861 | || ||| |||| || || ||||| | | ||| | ||||| |||| ||| Sbjct 33140 TGGA-CTTGAAGAAAAACACTGGGAAAGAAGAGAATCGTGCAAGGGATTTGTTTTTTGCC 33198 Query 110862 ATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATG 110921 ||||||||| | |||||||||||||| | || || || || |||| ||| ||| Sbjct 33199 ATGTGGATTCCCGATTTATTCATGAAGAGAGTCGAAAGCAACGGTGACTGGTGTCTGATG 33258 Query 110922 TGTCCTCATCGTTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTT 110978 |||||| | ||||||| | ||| || || | || ||||||||||| ||||| Sbjct 33259 TGTCCTAAAGAATCTCCTGATTTATTCGAAGTCTGGGGTGAAGAGTTTGAA-ACCTT 33314 Score = 89.7 bits (98), Expect = 1e-12 Identities = 121/169 (72%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 110987 ATATGAAAAAGAAGGCAAGTTTCGCAAACAAATTCCAGCTCAAGAACTTTGGTTCAAAAT 111046 |||||| || ||||| | || |||||| | | || |||||| || | |||| | | || Sbjct 33412 ATATGAGAAGGAAGGGAGGTATCGCAAGAAGGTGCCTGCTCAAAAATTGTGGTACCACAT 33471 Query 111047 CCTTGAATCACAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGATCATATTAATCG 111106 ||||||| ||| | ||||||||||| || || | ||||| || ||| |||||| Sbjct 33472 TATTGAATCCCAAATCGAAACTGGAACACCATACTTGTTGTACAAGGATGCGTGTAATCG 33531 Query 111107 CAAATCTAATCAAATGAATTTAGGAACAATTAAGTCTAGTAATTTGTGC 111155 ||||| ||||| |||| | ||||| || || | | ||||||||| Sbjct 33532 AAAATCCAATCAGCAGAATCTTGGAACCATCAAATGTTCAAATTTGTGC 33580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186669832821322