Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02] 9,402 sequences; 286,766,519 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq463 122 6e-23 seq159 118 7e-22 seq47 104 2e-17 >seq463 Length=112955 Score = 122 bits (134), Expect = 6e-23 Identities = 142/189 (75%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 33562 TTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATC 33621 ||||| |||||||||||||||||||| | | | || || | ||||||||||||||| ||| Sbjct 58489 TTTTGAATGTTGTAATCGGAGAGTGTCCTTCCATCCTCGAGTTGTTTTCCGGCAAAGATC 58430 Query 33622 AAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC 33681 || ||||||||||| | || | || || ||||| || || | | |||| || Sbjct 58429 AACCGCTGCTGATCCGGGGGGATTCCCTCCTTGTCCTGGATCTT-GGCCTTGACATTCTC 58371 Query 33682 -ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAA 33740 | ||||| || | |||||| |||| |||||| |||||||| || | ||||| || || Sbjct 58370 GATCGTGTCACTGGGTTCCACCTCAAGCGTGATGGTTTTACCCGTGAGGGTTTTAACGAA 58311 Query 33741 GATCTGCAT 33749 |||||||| Sbjct 58310 AATCTGCAT 58302 >seq159 Length=219009 Score = 118 bits (130), Expect = 7e-22 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||||||||| | ||| | || | ||| |||||| ||| ||||| |||||||| ||| Sbjct 157787 ACCACCTCTGAGACGGAGGACGAGATGAAGAGTGGACTCCTTTTGGATGTTGTAGTCGCT 157728 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| || || | || || | ||| ||||| ||||| |||||||||||||| ||| | || Sbjct 157727 GAGGGTACGGCCATCCTCAAGTTGCTTTCCAGCAAAGATCAAACGCTGCTGGTCTGGGGG 157668 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||| ||||| || || | | |||| || | |||||| | |||| Sbjct 157667 AATGCCTTCCTTGTCTTGGATCTT-AGCCTTGACATTTTCAATGGTGTCAGAAGGCTCCA 157609 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | |||| |||||||| || || || || || || |||||||||||||| Sbjct 157608 CCTCAAGGGTGATCGTCTTTCCAGTCAAAGTCTTGACAAAGATCTGCAT 157560 Score = 116 bits (128), Expect = 2e-21 Identities = 166/230 (72%), Gaps = 3/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||||||||| | ||| | || | ||| |||||| ||| ||||| |||||||| ||| Sbjct 159476 ACCACCTCTGAGACGGAGGACGAGATGAAGAGTGGACTCCTTTTGGATGTTGTAGTCGCT 159417 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| || || | || || | ||| ||||| ||||| |||||||||||||| ||| | || Sbjct 159416 GAGGGTTCGGCCATCCTCAAGTTGCTTTCCAGCAAAGATCAAACGCTGCTGGTCTGGGGG 159357 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||| ||||| || || | | |||| || | |||||| | |||| Sbjct 159356 AATGCCTTCCTTGTCTTGGATCTT-AGCCTTGACATTTTCAATGGTGTCAGAAGGCTCCA 159298 Query 33701 CGTCAACCGTGATCGT-TTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | |||| |||||||| ||| || || || || || |||||||||||||| Sbjct 159297 CCTCAAGGGTGATCGTCTTTTCCAGTCAAAGTCTTGACAAAGATCTGCAT 159248 Score = 105 bits (116), Expect = 4e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | || | ||| || ||| |||||||| ||||| || || || Sbjct 158242 ACCACCACGAAGACGAAGGACGAGATGAAGGGTGGATTCTTTTTGAATGTTATAGTCTGA 158183 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | ||| || |||| ||||| || ||||| ||||| || | ||||||||||||| | || Sbjct 158182 CAATGTTCGGCCGTCTTCCAACTGCTTTCCAGCAAAGATGAGACGCTGCTGATCTGGGGG 158123 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||| || || ||| || | | ||||| || | |||||| | |||| Sbjct 158122 GATACCTTCCTTATCTTGAATCTT-AGCCTTAACATTTTCGATGGTGTCAGAGGGCTCCA 158064 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||||| || || ||||| | || || ||||||||||||||| Sbjct 158063 CTTCCAATGTGATGGTCTTTCCTGTAAGGGTCTTGACAAAGATCTGCATA 158014 Score = 102 bits (112), Expect = 5e-17 Identities = 109/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||||||||| | ||| | || | ||| || ||| ||| || || || ||||| || || Sbjct 158563 ACCACCTCTGAGACGGAGGACGAGATGAAGGGTGGACTCCTTCTGGATATTGTAGTCCGA 158504 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||||| || |||| ||||||||||| || ||||| || | ||||||||||||| | || Sbjct 158503 CAGTGTTCGGCCGTCTTCCAATTGTTTACCAGCAAAGATGAGACGCTGCTGATCTGGGGG 158444 Query 33642 CACACCTTCTTTGTCGGCAATTTT 33665 | |||||| ||||| |||||| Sbjct 158443 AATACCTTCCTTGTCTTGAATTTT 158420 Score = 100 bits (110), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | | ||| | || | ||| || ||| |||||||| || ||||| ||| | Sbjct 158790 CCACCGCGGAGACGGAGGACGAGATGAAGGGTGGATTCTTTTTGGATATTGTAGTCGCTG 158731 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || || | || || | ||| ||||| ||||| || | ||||||||||||| | || Sbjct 158730 AGGGTACGACCATCCTCAAGTTGCTTTCCAGCAAAGATGAGACGCTGCTGATCTGGGGGA 158671 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | |||||| || || || || || | |||| || | ||||| || | |||||| Sbjct 158670 ATACCTTCCTTATCTTGGATCTT-TGCCTTGACATTCTCGATCGTGTCACTGGGTTCCAC 158612 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || | ||||| || || || || ||||| || || |||||||||||| Sbjct 158611 CTCTAAAGTGATGGTCTTTCCAGTCAACGTCTTGACGAAGATCTGCATA 158563 Score = 98.7 bits (108), Expect = 7e-16 Identities = 162/230 (70%), Gaps = 3/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||||||||| | ||| | || | ||| || ||| ||| || || |||||||| ||| Sbjct 158014 ACCACCTCTGAGACGGAGGACGAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCT 157955 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| || || | || || | ||| ||||| ||||| ||||||||||| || ||| | || Sbjct 157954 GAGGGTACGGCCATCCTCAAGTTGCTTTCCAGCAAAGATCAAACGCTGTTG-TCTGGGGG 157896 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||| || || ||| || | | ||| | || | ||||| | ||||| Sbjct 157895 AATTCCTTCCTTATCTTGAATCTT-GGCCTTAACGTTTTCGATAGTGTCAGAGGGTTCCA 157837 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||||| || || ||||| | ||| || ||||||||||||||| Sbjct 157836 CCTCCAATGTGATAGTCTTTCCTGTAAGCGTCTTAACAAAGATCTGCATA 157787 Score = 98.7 bits (108), Expect = 7e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||||| | ||| | || | ||| || ||| ||||| || ||||| || || || Sbjct 159246 CCACCTCGGAGACGGAGGACGAGATGAAGGGTGGATTCTTTCTGAATGTTATAGTCTGAA 159187 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || ||| | || ||||||||||| || ||||| || | ||||||||| ||| | || Sbjct 159186 AGGGTACGTCCATCTTCCAATTGTTTGCCAGCAAAGATAAGACGCTGCTGGTCTGGGGGA 159127 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||| ||||| || || | | |||| || | ||||| || | ||| || Sbjct 159126 ATGCCTTCCTTGTCTTGGATCTT-GGCCTTGACATTCTCGATCGTGTCACTGGGTTCTAC 159068 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| || || || || || ||||| || ||||||||||| Sbjct 159067 CTCTAAGGTGATGGTCTTTCCAGTCAAAGTTTTGACGAAGATCTGCAT 159020 Score = 95.1 bits (104), Expect = 8e-15 Identities = 146/206 (71%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 33546 ATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTG 33605 ||| ||||| || || || || |||||||| ||||| || ||| | || ||||| || Sbjct 159908 ATGCAGAGTCGATTCCTTCTGAATATTGTAATCAGAGAGAGTACGTCCATCCTCCAACTG 159849 Query 33606 TTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTT 33665 ||| || |||||||| | |||||| || ||| | || | |||||| || || || || Sbjct 159848 TTTACCAGCAAAAATAAGACGCTGTTGGTCTGGGGGAATACCTTCCTTATCTTGGATCTT 159789 Query 33666 CTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTG 33724 || | ||| || | |||||||| | ||| || || | ||||| || || || | Sbjct 159788 GGCCTTGA-CATTCTCGATCGTGTCGCTGGGTTCTACCTCCAAAGTGATGGTCTTTCCAG 159730 Query 33725 TTAACGTTTTTACAAAGATCTGCATA 33750 | || || || || |||||||||||| Sbjct 159729 TCAAAGTCTTGACGAAGATCTGCATA 159704 Score = 93.3 bits (102), Expect = 3e-14 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||| | ||| | || | ||| || ||| ||| || || || ||||| ||| Sbjct 159704 ACCACCTCGAAGACGGAGGACGAGATGAAGGGTGGACTCCTTCTGGATATTGTAGTCGCT 159645 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| || || | || || | ||| ||||| ||||| ||||||||||| || ||| | || Sbjct 159644 GAGGGTACGGCCATCCTCAAGTTGCTTTCCAGCAAAGATCAAACGCTGTTGGTCTGGGGG 159585 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||| ||||| ||| || | | ||| | || | ||||| | ||||| Sbjct 159584 GATTCCTTCCTTGTCTTGAATCTT-GGCCTTAACGTTTTCGATAGTGTCAGAGGGTTCCA 159526 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||||| || || ||||| | ||| || || |||||||||||| Sbjct 159525 CCTCCAATGTGATAGTCTTTCCTGTAAGCGTCTTAACGAAGATCTGCATA 159476 >seq47 Length=390960 Score = 104 bits (114), Expect = 2e-17 Identities = 164/231 (71%), Gaps = 3/231 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||| | ||| | || | ||| || || ||| ||||| ||||||||||| || Sbjct 276250 ACCACCTCGGAGACGAAGGACAAGATGAAGGGTAGACTCCTTTTGAATGTTGTAATCAGA 276309 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTT-CCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 || || || | || ||||| |||||| || |||||||| | ||||||||| ||| | | Sbjct 276310 AAGGGTACGGCCATCCTCCAACTGTTTTACCAGCAAAAATAAGACGCTGCTGGTCTGGTG 276369 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | | ||||| || || || || ||| |||| || | |||||| || | |||| Sbjct 276370 GGATCCCTTCCTTATCCTGGATCTTGGCCTTC-ACATTTTCAATGGTGTCACTGGGTTCC 276428 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || || | ||||| || || || || | || || ||||| ||||||||| Sbjct 276429 ACCTCGAGAGTGATGGTCTTGCCAGTAAGAGTCTTGACAAAAATCTGCATA 276479 Score = 100 bits (110), Expect = 2e-16 Identities = 140/194 (72%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 33558 CTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAA 33617 ||| ||||| ||||||||||| || || || || | || ||||| ||||| || ||||| Sbjct 276742 CTCCTTTTGAATGTTGTAATCAGAAAGGGTACGGCCATCCTCCAACTGTTTACCAGCAAA 276801 Query 33618 AATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACAT 33677 ||| | ||||||||| ||| | || | ||||| || || || || ||| |||| Sbjct 276802 AATAAGACGCTGCTGGTCTGGTGGGATCCCTTCCTTATCCTGGATCTTGGCCTTC-ACAT 276860 Query 33678 AGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTA 33736 || | |||||| || | |||||| || | ||||| || || || || | || || | Sbjct 276861 TTTCAATGGTGTCACTGGGTTCCACCTCGAGAGTGATGGTCTTGCCAGTAAGAGTCTTGA 276920 Query 33737 CAAAGATCTGCATA 33750 |||| ||||||||| Sbjct 276921 CAAAAATCTGCATA 276934 Score = 89.7 bits (98), Expect = 3e-13 Identities = 161/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||| | ||| | || | ||| || || ||| ||||| ||||||||||| || Sbjct 276479 ACCACCTCGGAGACGAAGGACAAGATGAAGGGTAGACTCCTTTTGAATGTTGTAATCAGA 276538 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| | || ||||| || ||||| |||||||| | ||||||||| ||| | || Sbjct 276539 AAGGGTGCGACCATCCTCCAACTGCTTTCCAGCAAAAATAAGACGCTGCTGGTCTGGTGG 276598 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | || || || || || || | | |||| || | |||||| || | ||||| Sbjct 276599 GATTCCCTCCTTATCTTGGATCTT-AGCCTTGACATTTTCAATGGTGTCACTGGGTTCCA 276657 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||||| || || || || | || || ||||| || |||||| Sbjct 276658 CCTCGAGAGTGATGGTCTTGCCAGTAAGAGTCTTGACAAA-AT-TGCATA 276705 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328666334835840