Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02]
9,402 sequences; 286,766,519 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq159 123 2e-23
seq263 111 1e-19
seq47 96.9 3e-15
>seq159
Length=219009
Score = 123 bits (136), Expect = 2e-23
Identities = 145/196 (74%), Gaps = 0/196 (0%)
Strand=Plus/Minus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
|| || ||||| || ||||||||||| | ||| || |||||| | ||| || || | |
Sbjct 157525 GATTCCTTTTGGATATTGTAGTCGCTGAGGGTGCGACCATCTTCCAACTGCTTTCCAGCA 157466
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| ||||| ||||||||||| || |||||||| ||||| ||| ||| ||||
Sbjct 157465 AAGATGAGACGTTGTTGATCTGGGGGAATGCCTTCCTTATCTTGAATCTTTGCCTTCACA 157406
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| ||| | ||| || | |||||||| || | || | ||| || ||||| || || ||
Sbjct 157405 TTTTCGATAGTGTCAGAAGGCTCCACCTCAAGGGTGATCGTCTTGCCAGTGAGTGTCTTC 157346
Query 132110 ATGAAAATCTGCATGA 132125
| ||||||||||||||
Sbjct 157345 ACGAAAATCTGCATGA 157330
Score = 107 bits (118), Expect = 2e-18
Identities = 140/194 (72%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
|| || ||||| || ||||||||||| | ||| || |||||| | ||| || || | |
Sbjct 158985 GATTCCTTTTGGATATTGTAGTCGCTGAGGGTGCGACCATCTTCCAACTGCTTTCCAGCA 158926
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| ||||||||||||||||| || |||||||| ||||| ||| || || |
Sbjct 158925 AAGATGAGACGCTGTTGATCTGGGGGAATGCCTTCCTTATCTTGAATCTTGGCCTTAACA 158866
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| ||| | || |||| |||||||| || | || | ||||| ||||| || || ||
Sbjct 158865 TTTTCGATGGTGTCGGAAGGCTCCACCTCAAGAGTGATGGTTTTGCCAGTAAGGGTCTTG 158806
Query 132110 ATGAAAATCTGCAT 132123
| ||||| |||||
Sbjct 158805 ACAAAAATTTGCAT 158792
Score = 95.1 bits (104), Expect = 1e-14
Identities = 138/195 (71%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
||||| ||||| |||||||||||||| | |||||| ||| || || || || || | |
Sbjct 157753 GACTCCTTTTGGATGTTGTAGTCGCTGAGGGTACGGCCATCCTCAAGTTGCTTTCCAGCA 157694
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| | |||||| || ||||| || |||||||| || || || || || |
Sbjct 157693 AAGATCAAACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCTTGGATCTTAGCCTTGACA 157634
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| ||| | || || | |||||||| || | || | ||| || ||||||| ||| ||
Sbjct 157633 TTTTCAATGGTGTCAGAAGGCTCCACCTCAAGGGTGATCGTCTTTCCAGTCAAAGTCTTG 157574
Query 132110 ATGAAAATCTGCATG 132124
| || |||||||||
Sbjct 157573 ACAAAGATCTGCATG 157559
Score = 89.7 bits (98), Expect = 5e-13
Identities = 136/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
|| |||||||| || ||||||||||| | |||||| ||| || || || || || | |
Sbjct 158757 GATTCTTTTTGGATATTGTAGTCGCTGAGGGTACGACCATCCTCAAGTTGCTTTCCAGCA 158698
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| |||||||| |||||||| || || ||||| ||||| || ||| || |
Sbjct 158697 AAGATGAGACGCTGCTGATCTGGGGGAATACCTTCCTTATCTTGGATCTTTGCCTTGACA 158638
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| || | || || | || ||||| || | || | || || ||||||| || ||
Sbjct 158637 TTCTCGATCGTGTCACTGGGTTCCACCTCTAAAGTGATGGTCTTTCCAGTCAACGTCTTG 158578
Query 132110 ATGAAAATCTGCAT 132123
| ||| ||||||||
Sbjct 158577 ACGAAGATCTGCAT 158564
Score = 89.7 bits (98), Expect = 5e-13
Identities = 138/196 (70%), Gaps = 1/196 (1%)
Strand=Plus/Minus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
||||| ||||| |||||||||||||| | ||| || ||| || || || || || | |
Sbjct 159442 GACTCCTTTTGGATGTTGTAGTCGCTGAGGGTTCGGCCATCCTCAAGTTGCTTTCCAGCA 159383
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| | |||||| || ||||| || |||||||| || || || || || |
Sbjct 159382 AAGATCAAACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCTTGGATCTTAGCCTTGACA 159323
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGT-TTTACCAGTCAGAGTTTT 132108
| ||| | || || | |||||||| || | || | ||| ||| ||||||| ||| ||
Sbjct 159322 TTTTCAATGGTGTCAGAAGGCTCCACCTCAAGGGTGATCGTCTTTTCCAGTCAAAGTCTT 159263
Query 132109 TATGAAAATCTGCATG 132124
| || |||||||||
Sbjct 159262 GACAAAGATCTGCATG 159247
>seq263
Length=158529
Score = 111 bits (122), Expect = 1e-19
Identities = 142/196 (72%), Gaps = 0/196 (0%)
Strand=Plus/Plus
Query 131928 TTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGG 131987
||||||| ||||||||||||||||| || | ||| | ||||||||||||||||||||
Sbjct 64856 TTGACTCCTTTTGAATGTTGTAGTCACTAAGGGTCCTACCATCTTCGAGCTGTTTACCGG 64915
Query 131988 AATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCA 132047
| |||| | ||||||||| ||||| || || || || || || || || || |
Sbjct 64916 CAAAGATCAAACGCTGTTGGTCTGGGGGGATTCCCTCCTTGTCTTGGATCTTGGCCTTGA 64975
Query 132048 ACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 132107
| ||| | |||||| | || || || || | || | ||||| ||||||| ||||
Sbjct 64976 CATTTTCGATAGTATCACTGGGTTCAACCTCAAGGGTGATAGTTTTCCCAGTCAATGTTT 65035
Query 132108 TTATGAAAATCTGCAT 132123
| | || ||||||||
Sbjct 65036 TCACAAAGATCTGCAT 65051
>seq47
Length=390960
Score = 96.9 bits (106), Expect = 3e-15
Identities = 145/202 (72%), Gaps = 3/202 (1%)
Strand=Plus/Plus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
||||| |||||||||||||| || | ||||| ||| || | |||||| | | ||
Sbjct 277663 GACTCCTTTTGAATGTTGTAATCAGAAAGCGTACGGCCATC-TCCAACTGTTTTCAGCAA 277721
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| |||||||| || ||||| || || ||||| ||||| || || ||||
Sbjct 277722 -AGATAAGACGCTGCTGGTCTGGTGGGATCCCTTCCTTATCCTGGATCTTGGCCTTCACA 277780
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| ||| | ||| |||| |||||||| |||| || | || || ||||| || || ||
Sbjct 277781 TTTTCAATAGTGTCGGAAGGCTCCACCTCGAGAGTGATGGTCTTGCCAGTGAGTGTCTTC 277840
Query 132110 ATGAAAATCTGCATGACTTATT 132131
| |||||| ||||||| |||||
Sbjct 277841 ACGAAAATTTGCATGA-TTATT 277861
Score = 93.3 bits (102), Expect = 4e-14
Identities = 137/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
||||| |||||||||||||| || | |||||| ||| || | ||||||||| | |
Sbjct 276740 GACTCCTTTTGAATGTTGTAATCAGAAAGGGTACGGCCATCCTCCAACTGTTTACCAGCA 276799
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
| || |||||||| || ||||| || || ||||| ||||| || || ||||
Sbjct 276800 AAAATAAGACGCTGCTGGTCTGGTGGGATCCCTTCCTTATCCTGGATCTTGGCCTTCACA 276859
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| ||| | || || | || ||||| |||| || | || || ||||| ||||| ||
Sbjct 276860 TTTTCAATGGTGTCACTGGGTTCCACCTCGAGAGTGATGGTCTTGCCAGTAAGAGTCTTG 276919
Query 132110 ATGAAAATCTGCAT 132123
| |||||||||||
Sbjct 276920 ACAAAAATCTGCAT 276933
Score = 89.7 bits (98), Expect = 5e-13
Identities = 151/215 (70%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968
|||||||| | || | ||||||| |||||||| ||||| ||| | |||||| |
Sbjct 276039 CGCAAAACAAGGTGAAGAGTTGACTCCTTTTGAATATTGTAATCGGAGAAGGTACGGCCA 276098
Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028
|| || | |||||| | | | || |||||||| || ||||| || || ||||| |||
Sbjct 276099 TCCTCCA-CTGTTTTT--GCAAAAATAAGACGCTGCTGGTCTGGTGG-ATCCCTTCCTTA 276154
Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088
|| || || ||||| | ||| | ||| || | |||||||| |||| || |
Sbjct 276155 TCCTGGATCTTGCCTTTCACATTTTCAATAGTGTCTGAAGGCTCCACCTCGAGAGTGATG 276214
Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| || ||||| ||||| || | |||||||||||
Sbjct 276215 GTCTTGCCAGTAAGAGTCTTGACAAAAATCTGCAT 276249
Score = 87.8 bits (96), Expect = 2e-12
Identities = 137/195 (70%), Gaps = 1/195 (1%)
Strand=Plus/Plus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTT-ACCGGA 131988
||||| |||||||||||||| || | |||||| ||| || | |||||| ||| |
Sbjct 276284 GACTCCTTTTGAATGTTGTAATCAGAAAGGGTACGGCCATCCTCCAACTGTTTTACCAGC 276343
Query 131989 ATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAA 132048
| | || |||||||| || ||||| || || ||||| ||||| || || ||||
Sbjct 276344 AAAAATAAGACGCTGCTGGTCTGGTGGGATCCCTTCCTTATCCTGGATCTTGGCCTTCAC 276403
Query 132049 CTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 132108
| ||| | || || | || ||||| |||| || | || || ||||| ||||| ||
Sbjct 276404 ATTTTCAATGGTGTCACTGGGTTCCACCTCGAGAGTGATGGTCTTGCCAGTAAGAGTCTT 276463
Query 132109 TATGAAAATCTGCAT 132123
| |||||||||||
Sbjct 276464 GACAAAAATCTGCAT 276478
Score = 86.0 bits (94), Expect = 6e-12
Identities = 138/196 (70%), Gaps = 3/196 (2%)
Strand=Plus/Plus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
||||| |||||||||||||| || | |||||| ||| || | |||||| || | |
Sbjct 277434 GACTCCTTTTGAATGTTGTAATCAGAAAGGGTACGGCCATCCTCCAACTGTTTTCCAGCA 277493
Query 131990 TAGATTAGACGCTGTTG--ATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCA 132047
|||| |||||||| | ||||| || || ||||| ||||| || || ||||
Sbjct 277494 AAGATAAGACGCTGCCGGCGTCTGGTGG-ATCCCTTCCTTATCCTGGATCTTGGCCTTCA 277552
Query 132048 ACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 132107
| ||| | ||| || | |||||||| |||| || | || || ||||| ||||| |
Sbjct 277553 CATTTTCAATAGTGTCTGAAGGCTCCACCTCGAGAGTGATGGTCTTGCCAGTAAGAGTCT 277612
Query 132108 TTATGAAAATCTGCAT 132123
| | |||||||||||
Sbjct 277613 TGACAAAAATCTGCAT 277628
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476555186268720
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