Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02] 9,402 sequences; 286,766,519 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq159 123 2e-23 seq263 111 1e-19 seq47 96.9 3e-15 >seq159 Length=219009 Score = 123 bits (136), Expect = 2e-23 Identities = 145/196 (74%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || || ||||| || ||||||||||| | ||| || |||||| | ||| || || | | Sbjct 157525 GATTCCTTTTGGATATTGTAGTCGCTGAGGGTGCGACCATCTTCCAACTGCTTTCCAGCA 157466 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| ||||| ||||||||||| || |||||||| ||||| ||| ||| |||| Sbjct 157465 AAGATGAGACGTTGTTGATCTGGGGGAATGCCTTCCTTATCTTGAATCTTTGCCTTCACA 157406 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | ||| | ||| || | |||||||| || | || | ||| || ||||| || || || Sbjct 157405 TTTTCGATAGTGTCAGAAGGCTCCACCTCAAGGGTGATCGTCTTGCCAGTGAGTGTCTTC 157346 Query 132110 ATGAAAATCTGCATGA 132125 | |||||||||||||| Sbjct 157345 ACGAAAATCTGCATGA 157330 Score = 107 bits (118), Expect = 2e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || || ||||| || ||||||||||| | ||| || |||||| | ||| || || | | Sbjct 158985 GATTCCTTTTGGATATTGTAGTCGCTGAGGGTGCGACCATCTTCCAACTGCTTTCCAGCA 158926 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| ||||||||||||||||| || |||||||| ||||| ||| || || | Sbjct 158925 AAGATGAGACGCTGTTGATCTGGGGGAATGCCTTCCTTATCTTGAATCTTGGCCTTAACA 158866 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | ||| | || |||| |||||||| || | || | ||||| ||||| || || || Sbjct 158865 TTTTCGATGGTGTCGGAAGGCTCCACCTCAAGAGTGATGGTTTTGCCAGTAAGGGTCTTG 158806 Query 132110 ATGAAAATCTGCAT 132123 | ||||| ||||| Sbjct 158805 ACAAAAATTTGCAT 158792 Score = 95.1 bits (104), Expect = 1e-14 Identities = 138/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| ||||| |||||||||||||| | |||||| ||| || || || || || | | Sbjct 157753 GACTCCTTTTGGATGTTGTAGTCGCTGAGGGTACGGCCATCCTCAAGTTGCTTTCCAGCA 157694 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| | |||||| || ||||| || |||||||| || || || || || | Sbjct 157693 AAGATCAAACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCTTGGATCTTAGCCTTGACA 157634 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | ||| | || || | |||||||| || | || | ||| || ||||||| ||| || Sbjct 157633 TTTTCAATGGTGTCAGAAGGCTCCACCTCAAGGGTGATCGTCTTTCCAGTCAAAGTCTTG 157574 Query 132110 ATGAAAATCTGCATG 132124 | || ||||||||| Sbjct 157573 ACAAAGATCTGCATG 157559 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || |||||||| || ||||||||||| | |||||| ||| || || || || || | | Sbjct 158757 GATTCTTTTTGGATATTGTAGTCGCTGAGGGTACGACCATCCTCAAGTTGCTTTCCAGCA 158698 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| |||||||| |||||||| || || ||||| ||||| || ||| || | Sbjct 158697 AAGATGAGACGCTGCTGATCTGGGGGAATACCTTCCTTATCTTGGATCTTTGCCTTGACA 158638 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || || | || ||||| || | || | || || ||||||| || || Sbjct 158637 TTCTCGATCGTGTCACTGGGTTCCACCTCTAAAGTGATGGTCTTTCCAGTCAACGTCTTG 158578 Query 132110 ATGAAAATCTGCAT 132123 | ||| |||||||| Sbjct 158577 ACGAAGATCTGCAT 158564 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/196 (70%), Gaps = 1/196 (1%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| ||||| |||||||||||||| | ||| || ||| || || || || || | | Sbjct 159442 GACTCCTTTTGGATGTTGTAGTCGCTGAGGGTTCGGCCATCCTCAAGTTGCTTTCCAGCA 159383 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| | |||||| || ||||| || |||||||| || || || || || | Sbjct 159382 AAGATCAAACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCTTGGATCTTAGCCTTGACA 159323 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGT-TTTACCAGTCAGAGTTTT 132108 | ||| | || || | |||||||| || | || | ||| ||| ||||||| ||| || Sbjct 159322 TTTTCAATGGTGTCAGAAGGCTCCACCTCAAGGGTGATCGTCTTTTCCAGTCAAAGTCTT 159263 Query 132109 TATGAAAATCTGCATG 132124 | || ||||||||| Sbjct 159262 GACAAAGATCTGCATG 159247 >seq263 Length=158529 Score = 111 bits (122), Expect = 1e-19 Identities = 142/196 (72%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 131928 TTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGG 131987 ||||||| ||||||||||||||||| || | ||| | |||||||||||||||||||| Sbjct 64856 TTGACTCCTTTTGAATGTTGTAGTCACTAAGGGTCCTACCATCTTCGAGCTGTTTACCGG 64915 Query 131988 AATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCA 132047 | |||| | ||||||||| ||||| || || || || || || || || || | Sbjct 64916 CAAAGATCAAACGCTGTTGGTCTGGGGGGATTCCCTCCTTGTCTTGGATCTTGGCCTTGA 64975 Query 132048 ACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 132107 | ||| | |||||| | || || || || | || | ||||| ||||||| |||| Sbjct 64976 CATTTTCGATAGTATCACTGGGTTCAACCTCAAGGGTGATAGTTTTCCCAGTCAATGTTT 65035 Query 132108 TTATGAAAATCTGCAT 132123 | | || |||||||| Sbjct 65036 TCACAAAGATCTGCAT 65051 >seq47 Length=390960 Score = 96.9 bits (106), Expect = 3e-15 Identities = 145/202 (72%), Gaps = 3/202 (1%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| |||||||||||||| || | ||||| ||| || | |||||| | | || Sbjct 277663 GACTCCTTTTGAATGTTGTAATCAGAAAGCGTACGGCCATC-TCCAACTGTTTTCAGCAA 277721 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| |||||||| || ||||| || || ||||| ||||| || || |||| Sbjct 277722 -AGATAAGACGCTGCTGGTCTGGTGGGATCCCTTCCTTATCCTGGATCTTGGCCTTCACA 277780 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | ||| | ||| |||| |||||||| |||| || | || || ||||| || || || Sbjct 277781 TTTTCAATAGTGTCGGAAGGCTCCACCTCGAGAGTGATGGTCTTGCCAGTGAGTGTCTTC 277840 Query 132110 ATGAAAATCTGCATGACTTATT 132131 | |||||| ||||||| ||||| Sbjct 277841 ACGAAAATTTGCATGA-TTATT 277861 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| |||||||||||||| || | |||||| ||| || | ||||||||| | | Sbjct 276740 GACTCCTTTTGAATGTTGTAATCAGAAAGGGTACGGCCATCCTCCAACTGTTTACCAGCA 276799 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 | || |||||||| || ||||| || || ||||| ||||| || || |||| Sbjct 276800 AAAATAAGACGCTGCTGGTCTGGTGGGATCCCTTCCTTATCCTGGATCTTGGCCTTCACA 276859 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | ||| | || || | || ||||| |||| || | || || ||||| ||||| || Sbjct 276860 TTTTCAATGGTGTCACTGGGTTCCACCTCGAGAGTGATGGTCTTGCCAGTAAGAGTCTTG 276919 Query 132110 ATGAAAATCTGCAT 132123 | ||||||||||| Sbjct 276920 ACAAAAATCTGCAT 276933 Score = 89.7 bits (98), Expect = 5e-13 Identities = 151/215 (70%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 |||||||| | || | ||||||| |||||||| ||||| ||| | |||||| | Sbjct 276039 CGCAAAACAAGGTGAAGAGTTGACTCCTTTTGAATATTGTAATCGGAGAAGGTACGGCCA 276098 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 || || | |||||| | | | || |||||||| || ||||| || || ||||| ||| Sbjct 276099 TCCTCCA-CTGTTTTT--GCAAAAATAAGACGCTGCTGGTCTGGTGG-ATCCCTTCCTTA 276154 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || || || ||||| | ||| | ||| || | |||||||| |||| || | Sbjct 276155 TCCTGGATCTTGCCTTTCACATTTTCAATAGTGTCTGAAGGCTCCACCTCGAGAGTGATG 276214 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || ||||| ||||| || | ||||||||||| Sbjct 276215 GTCTTGCCAGTAAGAGTCTTGACAAAAATCTGCAT 276249 Score = 87.8 bits (96), Expect = 2e-12 Identities = 137/195 (70%), Gaps = 1/195 (1%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTT-ACCGGA 131988 ||||| |||||||||||||| || | |||||| ||| || | |||||| ||| | Sbjct 276284 GACTCCTTTTGAATGTTGTAATCAGAAAGGGTACGGCCATCCTCCAACTGTTTTACCAGC 276343 Query 131989 ATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAA 132048 | | || |||||||| || ||||| || || ||||| ||||| || || |||| Sbjct 276344 AAAAATAAGACGCTGCTGGTCTGGTGGGATCCCTTCCTTATCCTGGATCTTGGCCTTCAC 276403 Query 132049 CTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 132108 | ||| | || || | || ||||| |||| || | || || ||||| ||||| || Sbjct 276404 ATTTTCAATGGTGTCACTGGGTTCCACCTCGAGAGTGATGGTCTTGCCAGTAAGAGTCTT 276463 Query 132109 TATGAAAATCTGCAT 132123 | ||||||||||| Sbjct 276464 GACAAAAATCTGCAT 276478 Score = 86.0 bits (94), Expect = 6e-12 Identities = 138/196 (70%), Gaps = 3/196 (2%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| |||||||||||||| || | |||||| ||| || | |||||| || | | Sbjct 277434 GACTCCTTTTGAATGTTGTAATCAGAAAGGGTACGGCCATCCTCCAACTGTTTTCCAGCA 277493 Query 131990 TAGATTAGACGCTGTTG--ATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCA 132047 |||| |||||||| | ||||| || || ||||| ||||| || || |||| Sbjct 277494 AAGATAAGACGCTGCCGGCGTCTGGTGG-ATCCCTTCCTTATCCTGGATCTTGGCCTTCA 277552 Query 132048 ACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 132107 | ||| | ||| || | |||||||| |||| || | || || ||||| ||||| | Sbjct 277553 CATTTTCAATAGTGTCTGAAGGCTCCACCTCGAGAGTGATGGTCTTGCCAGTAAGAGTCT 277612 Query 132108 TTATGAAAATCTGCAT 132123 | | ||||||||||| Sbjct 277613 TGACAAAAATCTGCAT 277628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476555186268720