Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02] 9,402 sequences; 286,766,519 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq2271 80.6 8e-12 seq2113 80.6 8e-12 seq36 80.6 8e-12 >seq2271 Length=29040 Score = 80.6 bits (88), Expect = 8e-12 Identities = 61/72 (85%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||| || |||| | | Sbjct 13480 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCGCTAGTTCGATC 13539 Query 2829 CCGGGCTTCAGC 2840 | || ||| || Sbjct 13540 CTGGCTTTCGGC 13551 >seq2113 Length=31065 Score = 80.6 bits (88), Expect = 8e-12 Identities = 61/72 (85%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||| || |||| | | Sbjct 23770 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCGCTAGTTCGATC 23829 Query 2829 CCGGGCTTCAGC 2840 | || ||| || Sbjct 23830 CTGGCTTTCGGC 23841 >seq36 Length=435307 Score = 80.6 bits (88), Expect = 8e-12 Identities = 61/72 (85%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||| || |||| | | Sbjct 372168 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCGCTAGTTCGATC 372227 Query 2829 CCGGGCTTCAGC 2840 | || ||| || Sbjct 372228 CTGGCTTTCGGC 372239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15847970116290