Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02]
9,402 sequences; 286,766,519 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq159 102 7e-17
seq263 82.4 7e-11
>seq159
Length=219009
Score = 102 bits (112), Expect = 7e-17
Identities = 145/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
||||| | || || || || || || ||||| | ||||| | || || ||| |||
Sbjct 158564 ATGCAGATCTTCGTCAAGACGTTGACTGGAAAGACCATCACTTTAGAGGTGGAACCCAGT 158623
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|| || |||||| | || || ||| || ||||| || ||||| || || ||||||
Sbjct 158624 GACACGATCGAGAATGTCAAGGCAAAGATCCAAGATAAGGAAGGTATTCCCCCAGATCAG 158683
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354
|| | ||||| | | || || ||||| || |||| | | | ||||||| ||||||
Sbjct 158684 CAGCGTCTCATCTTTGCTGGAAAGCAACTTGAGGATGGTCGTACCCTCAGCGACTACAAT 158743
Query 25355 ATTCAAAAAGAATCCACCATTCAT 25378
|| ||||||||||||||| |||||
Sbjct 158744 ATCCAAAAAGAATCCACCCTTCAT 158767
>seq263
Length=158529
Score = 82.4 bits (90), Expect = 7e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
||||| | ||||| |||||||| || || ||| | ||||| | || || ||| |||
Sbjct 65051 ATGCAGATCTTTGTGAAAACATTGACTGGGAAAACTATCACCCTTGAGGTTGAACCCAGT 64992
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
||||||||||| | || || || || || || ||||| || || || || ||
Sbjct 64991 GATACTATCGAAAATGTCAAGGCCAAGATCCAAGACAAGGAGGGAATCCCCCCAGACCAA 64932
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354
|| | | || | | ||| ||||| |||||||||| ||| | | || || |||||
Sbjct 64931 CAGCGTTTGATCTTTGCCGGTAAACAGCTCGAAGATGGTAGGACCCTTAGTGACTACAAC 64872
Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGA 25402
|||||||| || || || | ||| | ||| | || | |||| |||
Sbjct 64871 ATTCAAAAGGAGTCAACGTTGCATCTTGTGCTCAGGCTTCGAGGTGGA 64824
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445042090280640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |