Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02] 9,402 sequences; 286,766,519 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq1326 109 7e-19 >seq1326 Length=48828 Score = 109 bits (120), Expect = 7e-19 Identities = 193/281 (69%), Gaps = 3/281 (1%) Strand=Plus/Minus Query 118593 ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATT 118652 || ||||| ||||| ||||| | | || || ||| | ||||| ||||| | | | Sbjct 33756 ACTGGATAGTAATTCACGTCGATGATTTTGTTCAGGTTTCTTGTGACCACCTTACTAACT 33697 Query 118653 TCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCG 118712 || | | || | | ||||| | ||||| || || |||||| || | || Sbjct 33696 TCCTTCAATTTCTTGAAATCATATGTGCGA---TCAGGTTTCACATACATATTCACAGCA 33640 Query 118713 ATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTG 118772 || || |||| ||| ||||| | | |||||||| || ||||| | ||||| ||| Sbjct 33639 ATAGATGCCAAATTGCACACGGCTATTTCATCCTTTGAAGAATACTCGACTATTTCAGTG 33580 Query 118773 CACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCA 118832 ||||| ||||||| || ||||| || | |||| ||||| || ||| ||||||||| Sbjct 33579 CACAAATTTGAACATTTGATGGTTCCAAGATTCTGCTGATTGGATTTTCGATTACACGCA 33520 Query 118833 TCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGA 118873 |||||||| | || |||||| || || || || ||||||| Sbjct 33519 TCCTTGTACAACAAGTATGGTGTTCCAGTTTCGATTTGGGA 33479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618362518403120