Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02] 9,402 sequences; 286,766,519 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq159 93.3 4e-14 >seq159 Length=219009 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 39081 ATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTG 39140 ||| || ||| ||||| || || ||||| || | ||| || ||| | || || | || Sbjct 159223 ATGAAGGGTGGATTCTTTCTGAATGTTATAGTCTGAAAGGGTACGTCCATCTTCCAATTG 159164 Query 39141 TTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTT 39200 |||||| ||||| ||||||||||||||||| | ||| | || || ||||| ||| || Sbjct 159163 TTTGCCAGCAAAGATAAGACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCTTGGATCTT 159104 Query 39201 CTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGT 39260 |||| || | | ||| || || | || || || | ||||| | ||||| || Sbjct 159103 GGCCTTGACATTCTCGATCGTGTCACTGGGTTCTACCTCTAAGGTGATGGTCTTTCCAGT 159044 Query 39261 CAGCGTTTTAACAAAGATTTGCAT 39284 || ||||| || ||||| ||||| Sbjct 159043 CAAAGTTTTGACGAAGATCTGCAT 159020 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429496379712026