Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02]
9,402 sequences; 286,766,519 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq463 118 7e-22
seq159 107 1e-18
seq263 105 5e-18
seq47 89.7 3e-13
>seq463
Length=112955
Score = 118 bits (130), Expect = 7e-22
Identities = 143/192 (74%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|||||||||||||||||||||||||||||||| ||||| ||||| || || || || ||
Sbjct 58299 AAAATGCAGATTTTCGTTAAAACCCTCACGGGTAAAACCATCACGCTTGAGGTGGAACCC 58358
Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726
| ||||| | || ||| | || | || || ||||| || || | || || ||
Sbjct 58359 AGTGACACGATCGAGAATGTCAAGGC-CAAGATCCAGGACAAGGAGGGAATCCCCCCGGA 58417
Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786
||| ||||| || || |||||||| |||||||| || || | | | || | ||||||
Sbjct 58418 TCAGCAGCGGTTGATCTTTGCCGGAAAACAACTCGAGGATGGAAGGACACTCTCCGATTA 58477
Query 23787 CAACATACAAAA 23798
|||||| |||||
Sbjct 58478 CAACATTCAAAA 58489
>seq159
Length=219009
Score = 107 bits (118), Expect = 1e-18
Identities = 146/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| || || ||||| || || |||||||| || || || || | |
Sbjct 157332 ATGCAGATTTTCGTGAAGACACTCACTGGCAAGACGATCACCCTTGAGGTGGAGCCTTCT 157391
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
|||||| | |||| | || ||| ||| || || ||||| | || |||||||||
Sbjct 157392 GACACTATCGAAAATGTGAAGGCAAAGATTCAAGATAAGGAAGGCATTCCCCCAGATCAA 157451
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
|| ||| | || ||||| || || || ||||||| | ||||| | |||| |||||
Sbjct 157452 CAACGTCTCATCTTTGCTGGAAAGCAGTTGGAAGATGGTCGCACCCTCAGCGACTACAAT 157511
Query 23791 ATACAAAAAGAGTCCACATTACAT 23814
|| ||||| || || ||| | |||
Sbjct 157512 ATCCAAAAGGAATCTACACTCCAT 157535
Score = 104 bits (114), Expect = 2e-17
Identities = 148/206 (72%), Gaps = 2/206 (1%)
Strand=Plus/Plus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
|||||| ||||| || || ||||| || || ||||| |||||||| || || || | |
Sbjct 158791 AATGCAAATTTTTGTCAAGACCCTTACTGGCAAAACCATCACTCTTGAGGTGGAGCCTTC 158850
Query 23670 GGACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728
||||| | |||| | |||| | || | || || || ||||| | || |||||||
Sbjct 158851 CGACACCATCGAAAATGTTAAGGCCAAGA-TTCAAGATAAGGAAGGCATTCCCCCAGATC 158909
Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788
|||||||| | || ||||| || || || ||||||| | ||||| | |||| ||||
Sbjct 158910 AACAGCGTCTCATCTTTGCTGGAAAGCAGTTGGAAGATGGTCGCACCCTCAGCGACTACA 158969
Query 23789 ACATACAAAAAGAGTCCACATTACAT 23814
| || ||||| || || ||| | |||
Sbjct 158970 ATATCCAAAAGGAATCTACACTCCAT 158995
Score = 104 bits (114), Expect = 2e-17
Identities = 141/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| |||||||| || || || ||||| || ||||| | || || || || |
Sbjct 159477 ATGCAGATCTTCGTTAAGACGCTTACAGGAAAGACTATCACATTGGAGGTGGAACCCTCT 159536
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
|||||| | |||| | || || ||| ||||| ||||| | || ||||| |||
Sbjct 159537 GACACTATCGAAAACGTTAAGGCCAAGATTCAAGACAAGGAAGGAATCCCCCCAGACCAA 159596
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
|||||||| || ||||| || || ||||| || || | || || | |||| |||||
Sbjct 159597 CAGCGTTTGATCTTTGCTGGAAAGCAACTTGAGGATGGCCGTACCCTCAGCGACTACAAT 159656
Query 23791 ATACAAAAAGAGTCCAC 23807
|| || || ||||||||
Sbjct 159657 ATCCAGAAGGAGTCCAC 159673
Score = 95.1 bits (104), Expect = 8e-15
Identities = 140/197 (71%), Gaps = 1/197 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || ||||| || || || ||||| || ||||| | || || || || |
Sbjct 157788 ATGCAGATCTTTGTTAAGACGCTTACAGGAAAGACTATCACATTGGAGGTGGAACCCTCT 157847
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
|||||| | |||| | || || ||| || || ||||| | || ||||| |||
Sbjct 157848 GACACTATCGAAAACGTTAAGGCCAAGATTCAAGATAAGGAAGGAATTCCCCCAGA-CAA 157906
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
|||||||| || ||||| || || ||||| || || | || || | |||| ||||||
Sbjct 157907 CAGCGTTTGATCTTTGCTGGAAAGCAACTTGAGGATGGCCGTACCCTCAGCGACTACAAC 157966
Query 23791 ATACAAAAAGAGTCCAC 23807
|| || || ||||||||
Sbjct 157967 ATCCAGAAGGAGTCCAC 157983
>seq263
Length=158529
Score = 105 bits (116), Expect = 5e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| || || ||||| | || || ||||| ||||| || || ||||| |||
Sbjct 65051 ATGCAGATCTTTGTGAAAACATTGACTGGGAAAACTATCACCCTTGAGGTTGAACCCAGT 64992
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
|| ||| | |||| | || || || ||||| || || | || ||||| |||
Sbjct 64991 GATACTATCGAAAATGTCAAGGCCAAGATCCAAGACAAGGAGGGAATCCCCCCAGACCAA 64932
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
|||||||| || |||||||| ||||| || ||||| | | || | | || ||||||
Sbjct 64931 CAGCGTTTGATCTTTGCCGGTAAACAGCTCGAAGATGGTAGGACCCTTAGTGACTACAAC 64872
Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838
|| ||||| ||||| || || ||| | || | ||| | ||||| |||
Sbjct 64871 ATTCAAAAGGAGTCAACGTTGCATCTTGTGCTCAGGCTTCGAGGTGGA 64824
>seq47
Length=390960
Score = 89.7 bits (98), Expect = 3e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||||||||| || || || || || || || || ||||||||||| || || |||
Sbjct 276933 ATGCAGATTTTTGTCAAGACTCTTACTGGCAAGACCATCACTCTCGAGGTGGAACCCAGT 276874
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| |||||| | || || || || || ||||| | || ||||| ||
Sbjct 276873 GACACCATTGAAAATGTGAAGGCCAAGATCCAGGATAAGGAAGGGATCCCACCAGACCAG 276814
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
|||||| | || ||||| || ||||| |||| || | || || | |||||||||
Sbjct 276813 CAGCGTCTTATTTTTGCTGGTAAACAGTTGGAGGATGGCCGTACCCTTTCTGATTACAAC 276754
Query 23791 ATACAAAAAGAGTCCAC 23807
|| ||||| ||||| ||
Sbjct 276753 ATTCAAAAGGAGTCTAC 276737
Score = 84.2 bits (92), Expect = 1e-11
Identities = 138/198 (70%), Gaps = 1/198 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||||||||| || || || || || || || || ||||||||||| || || |||
Sbjct 276478 ATGCAGATTTTTGTCAAGACTCTTACTGGCAAGACCATCACTCTCGAGGTGGAACCCAGT 276419
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| |||||| | || || || || || ||||| | || ||||| ||
Sbjct 276418 GACACCATTGAAAATGTGAAGGCCAAGATCCAGGATAAGGAAGGGATCCCACCAGACCAG 276359
Query 23731 CAGCGTTTAATATTTGCCGG-CAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|||||| | || ||||| || ||||| |||| || | || || | ||||||||
Sbjct 276358 CAGCGTCTTATTTTTGCTGGTAAAACAGTTGGAGGATGGCCGTACCCTTTCTGATTACAA 276299
Query 23790 CATACAAAAAGAGTCCAC 23807
||| ||||| ||||| ||
Sbjct 276298 CATTCAAAAGGAGTCTAC 276281
Score = 82.4 bits (90), Expect = 5e-11
Identities = 138/197 (70%), Gaps = 2/197 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| |||||||| || || ||||| || || || ||||||||||| || || | |
Sbjct 277854 ATGCAAATTTTCGTGAAGACACTCACTGGCAAGACCATCACTCTCGAGGTGGAGCCTTCC 277795
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
|||||| |||||| | || || || || || ||||| | || ||||| ||
Sbjct 277794 GACACTATTGAAAATGTGAAGGCCAAGATCCAGGATAAGGAAGGGATCCCACCAGACCAG 277735
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
|||||| | || |||| | | ||||| ||| ||| | || || | |||||||||
Sbjct 277734 CAGCGTCTTATCTTTG-CTGAAAACAGTTGG-AGATGGCCGTACGCTTTCTGATTACAAC 277677
Query 23791 ATACAAAAAGAGTCCAC 23807
|| ||||| ||||| ||
Sbjct 277676 ATTCAAAAGGAGTCTAC 277660
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 337970868536216
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |