Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02] 9,402 sequences; 286,766,519 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq159 158 3e-33 seq47 122 2e-22 seq263 111 4e-19 seq11 86.0 1e-11 >seq159 Length=219009 Score = 158 bits (174), Expect = 3e-33 Identities = 162/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| || ||||| || ||||| ||||||| |||||| ||| | || | |||||| Sbjct 157543 AGGACGAGATGGAGTGTAGATTCCTTTTGGATATTGTAGTCGCTGAGGGTGCGACCATCT 157484 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || | |||||| ||||| ||||| || |||||||| || || ||||| |||||||| ||| Sbjct 157483 TCCAACTGCTTTCCAGCAAAGATGAGACGTTGTTGATCTGGGGGAATGCCTTCCTTATCT 157424 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || |||||| ||||||| |||||| ||||| || | ||||| || | ||||||||| Sbjct 157423 TGAATCTTTGCCTTCACATTTTCGATAGTGTCAGAAGGCTCCACCTCAAGGGTGATCGTC 157364 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || | || || | ||| | ||||| Sbjct 157363 TTGCCAGTGAGTGTCTTCACGAAAATCTGCAT 157332 Score = 158 bits (174), Expect = 3e-33 Identities = 162/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| || || || |||||||||||||||| |||||| ||| | || | ||||| Sbjct 158775 AGGACGAGATGAAGGGTGGATTCTTTTTGGATATTGTAGTCGCTGAGGGTACGACCATCC 158716 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || ||||| ||||| ||||| || || || || || || |||||||||||||| ||| Sbjct 158715 TCAAGTTGCTTTCCAGCAAAGATGAGACGCTGCTGATCTGGGGGAATACCTTCCTTATCT 158656 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 ||||||||| ||| ||| ||||| ||||| || |||||| ||||| ||||| ||| Sbjct 158655 TGGATCTTTGCCTTGACATTCTCGATCGTGTCACTGGGTTCCACCTCTAAAGTGATGGTC 158596 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || ||||| || || | ||| | ||||| Sbjct 158595 TTTCCAGTCAACGTCTTGACGAAGATCTGCAT 158564 Score = 158 bits (174), Expect = 3e-33 Identities = 168/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | |||||||| || ||||| ||||| || || | ||||||||| | | ||| Sbjct 159926 ACGAAGACGAAGGACAAGATGCAGAGTCGATTCCTTCTGAATATTGTAATCAGAGAGAGT 159867 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || | ||| || ||||| || ||||| || |||||||| || |||||||| Sbjct 159866 ACGTCCATCCTCCAACTGTTTACCAGCAAAAATAAGACGCTGTTGGTCTGGGGGAATACC 159807 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||| ||||||||||| ||| ||| ||||| ||||| || ||| || || || Sbjct 159806 TTCCTTATCTTGGATCTTGGCCTTGACATTCTCGATCGTGTCGCTGGGTTCTACCTCCAA 159747 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| ||||| || |||||||| || | ||| | ||||| Sbjct 159746 AGTGATGGTCTTTCCAGTCAAAGTCTTGACGAAGATCTGCAT 159705 Score = 145 bits (160), Expect = 2e-29 Identities = 151/198 (76%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | ||||| || || || |||||||||||||| | || || || | ||| || Sbjct 158236 ACGAAGACGAAGGACGAGATGAAGGGTGGATTCTTTTTGAATGTTATAGTCTGACAATGT 158177 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 || || ||||| | |||||| ||||| ||||| || || || || || || || ||||| Sbjct 158176 TCGGCCGTCTTCCAACTGCTTTCCAGCAAAGATGAGACGCTGCTGATCTGGGGGGATACC 158117 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||| ||||| ||||| ||| ||| |||||||||||| |||| ||||| || || Sbjct 158116 TTCCTTATCTTGAATCTTAGCCTTAACATTTTCGATGGTGTCAGAGGGCTCCACTTCCAA 158057 Query 225672 CGTGATCGTCTTGCCCGT 225689 ||||| ||||| || || Sbjct 158056 TGTGATGGTCTTTCCTGT 158039 Score = 143 bits (158), Expect = 6e-29 Identities = 150/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| || || |||||||| || ||||||| ||||| ||| | || | ||||| Sbjct 157771 AGGACGAGATGAAGAGTGGACTCCTTTTGGATGTTGTAGTCGCTGAGGGTACGGCCATCC 157712 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || ||||| ||||| ||||| | || || ||||| || ||||| |||||||||||| Sbjct 157711 TCAAGTTGCTTTCCAGCAAAGATCAAACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCT 157652 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| ||| |||||||| || | ||||| || | ||||||||| Sbjct 157651 TGGATCTTAGCCTTGACATTTTCAATGGTGTCAGAAGGCTCCACCTCAAGGGTGATCGTC 157592 Query 225682 TTGCCCGTCAAAGTTTT 225698 || || |||||||| || Sbjct 157591 TTTCCAGTCAAAGTCTT 157575 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| || || || ||||||||||| || | || || || | | || | |||||| Sbjct 159231 AGGACGAGATGAAGGGTGGATTCTTTCTGAATGTTATAGTCTGAAAGGGTACGTCCATCT 159172 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || | || || ||||| |||||||| || || ||||| || ||||| |||||||||||| Sbjct 159171 TCCAATTGTTTGCCAGCAAAGATAAGACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCT 159112 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| ||||| ||||| || ||| || ||||| ||||| ||| Sbjct 159111 TGGATCTTGGCCTTGACATTCTCGATCGTGTCACTGGGTTCTACCTCTAAGGTGATGGTC 159052 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || ||||||||||| | ||| | ||||| Sbjct 159051 TTTCCAGTCAAAGTTTTGACGAAGATCTGCAT 159020 Score = 141 bits (156), Expect = 2e-28 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| || ||||| || ||||| ||||||| |||||| ||| | || | |||||| Sbjct 159003 AGGACGAGATGGAGTGTAGATTCCTTTTGGATATTGTAGTCGCTGAGGGTGCGACCATCT 158944 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || | |||||| ||||| ||||| || || ||||| || || ||||| |||||||| ||| Sbjct 158943 TCCAACTGCTTTCCAGCAAAGATGAGACGCTGTTGATCTGGGGGAATGCCTTCCTTATCT 158884 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||| ||| |||||||||||| || | ||||| || | ||||| || Sbjct 158883 TGAATCTTGGCCTTAACATTTTCGATGGTGTCGGAAGGCTCCACCTCAAGAGTGATGGTT 158824 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 ||||| || | || || | || | ||||||| Sbjct 158823 TTGCCAGTAAGGGTCTTGACAAAAATTTGCATT 158791 Score = 141 bits (156), Expect = 2e-28 Identities = 151/198 (76%), Gaps = 1/198 (1%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| || || |||||||| || ||||||| ||||| ||| | |||| ||||| Sbjct 159460 AGGACGAGATGAAGAGTGGACTCCTTTTGGATGTTGTAGTCGCTGAGGGTTCGGCCATCC 159401 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || ||||| ||||| ||||| | || || ||||| || ||||| |||||||||||| Sbjct 159400 TCAAGTTGCTTTCCAGCAAAGATCAAACGCTGCTGGTCTGGGGGAATGCCTTCCTTGTCT 159341 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| ||| |||||||| || | ||||| || | ||||||||| Sbjct 159340 TGGATCTTAGCCTTGACATTTTCAATGGTGTCAGAAGGCTCCACCTCAAGGGTGATCGTC 159281 Query 225682 -TTGCCCGTCAAAGTTTT 225698 || || |||||||| || Sbjct 159280 TTTTCCAGTCAAAGTCTT 159263 Score = 132 bits (146), Expect = 1e-25 Identities = 162/221 (73%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||| | ||||| || || || ||||| || || |||| |||||| ||| | || Sbjct 159697 CGAAGACGGAGGACGAGATGAAGGGTGGACTCCTTCTGGATATTGTAGTCGCTGAGGGTA 159638 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | ||||| || || ||||| ||||| ||||| | || |||||||| || || || ||| Sbjct 159637 CGGCCATCCTCAAGTTGCTTTCCAGCAAAGATCAAACGCTGTTGGTCTGGGGGGATTCCT 159578 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 ||||||||||| ||||| ||| || |||||| ||||| |||| |||||| || || Sbjct 159577 TCCTTGTCTTGAATCTTGGCCTTAACGTTTTCGATAGTGTCAGAGGGTTCCACCTCCAAT 159518 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| ||||| || || | || || | ||| | ||||| Sbjct 159517 GTGATAGTCTTTCCTGTAAGCGTCTTAACGAAGATCTGCAT 159477 Score = 111 bits (122), Expect = 4e-19 Identities = 123/164 (75%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| || || || ||||| || || |||| |||||| || | || |||| || ||| Sbjct 158547 AGGACGAGATGAAGGGTGGACTCCTTCTGGATATTGTAGTCCGACAGTGTTCGGCCGTCT 158488 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || | || || ||||| ||||| || || || || || || |||||||||||||||||| Sbjct 158487 TCCAATTGTTTACCAGCAAAGATGAGACGCTGCTGATCTGGGGGAATACCTTCCTTGTCT 158428 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCAC 225665 || || ||| ||| ||| |||||| ||||| || | ||| || Sbjct 158427 TGAATTTTTGCCTTGACATTTTCGATCGTGTCAGATGGTTCAAC 158384 >seq47 Length=390960 Score = 122 bits (134), Expect = 2e-22 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 |||||||| || || || || || ||||| | |||||||| | | || | ||||| Sbjct 276495 AGGACAAGATGAAGGGTAGACTCCTTTTGAATGTTGTAATCAGAAAGGGTGCGACCATCC 276554 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || | |||||| ||||| || ||||| || || ||||| || || || || ||||| ||| Sbjct 276555 TCCAACTGCTTTCCAGCAAAAATAAGACGCTGCTGGTCTGGTGGGATTCCCTCCTTATCT 276614 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| ||| |||||||| || |||||| || | ||||| ||| Sbjct 276615 TGGATCTTAGCCTTGACATTTTCAATGGTGTCACTGGGTTCCACCTCGAGAGTGATGGTC 276674 Query 225682 TTGCCCGTCAAAGTTTT 225698 ||||| || | ||| || Sbjct 276675 TTGCCAGTAAGAGTCTT 276691 Score = 116 bits (128), Expect = 9e-21 Identities = 152/207 (73%), Gaps = 4/207 (2%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || |||||||| ||||| || || ||||| | ||||||||||| || || Sbjct 276032 ACGAAGACGCAAAACAAGGTGAAGAGTTGACTCCTTTTGAATATTGTAATCGGAGAAGGT 276091 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || | ||| || || || ||||| || || ||||| || || || || Sbjct 276092 ACGGCCATCCTCCA-CTGTTT--TTGCAAAAATAAGACGCTGCTGGTCTGGTGG-ATCCC 276147 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||| || |||||||| |||||| ||| || |||||||| | ||||| || | Sbjct 276148 TTCCTTATCCTGGATCTTGCCTTTCACATTTTCAATAGTGTCTGAAGGCTCCACCTCGAG 276207 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTT 225698 ||||| |||||||| || | ||| || Sbjct 276208 AGTGATGGTCTTGCCAGTAAGAGTCTT 276234 >seq263 Length=158529 Score = 111 bits (122), Expect = 4e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||| || || ||||| || | || || || ||||| | ||||| || | || Sbjct 64831 CGAAGCCTGAGCACAAGATGCAACGTTGACTCCTTTTGAATGTTGTAGTCACTAAGGGTC 64890 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 || |||||||| ||||| || || || ||||| | || |||||||| || || || || Sbjct 64891 CTACCATCTTCGAGCTGTTTACCGGCAAAGATCAAACGCTGTTGGTCTGGGGGGATTCCC 64950 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 ||||||||||||||||| ||| ||| |||||| || || || ||| || || | Sbjct 64951 TCCTTGTCTTGGATCTTGGCCTTGACATTTTCGATAGTATCACTGGGTTCAACCTCAAGG 65010 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTT 225698 ||||| || || || ||||| ||||| Sbjct 65011 GTGATAGTTTTCCCAGTCAATGTTTT 65036 >seq11 Length=672161 Score = 86.0 bits (94), Expect = 1e-11 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529 ||| || || || |||||||| || || ||||| || |||||||| || || |||||||| Sbjct 505738 GAAAATCTGCCCGTCAGTAATGGAAATCACATTAGTTGGGATATATGCCGACACATCACC 505797 Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCAAAATTTTTATT 4586 || || ||||| | || || | ||| |||| |||||||||||| |||| ||| Sbjct 505798 GGCCTGAGTTTCAATAATTGGGAGGGCAGTTAAAGATCCACCACCATTGTTTTCATT 505854 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192387543964988