Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02]
9,402 sequences; 286,766,519 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq30 87.8 1e-12
>seq30
Length=458414
Score = 87.8 bits (96), Expect = 1e-12
Identities = 149/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 30076
|| || | ||| || || || ||||| ||||||||||| || || |||| | |||
Sbjct 345338 AAGTGACGCCATTGAAAGCCATACACAGGTCCCAGGTCACCTTCCTCCCGATCAGTGAAT 345397
Query 30077 CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCG 30136
||| | ||||||| || || |||||| ||| | ||||| || | || || || |
Sbjct 345398 CCCATTTTGTCCAGGAATTCCCTGGAAGAGTTTCCATCCCAAATGTGAACTCCTTTAGCT 345457
Query 30137 GAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCC 30196
||||| || | ||||| | || | || |||||||| ||||||||||| | |
Sbjct 345458 TTCAGCTCATTTGCATTTGTACATCCCTTCACAAACCACAGAAGCTCCTCCACAATTCCT 345517
Query 30197 TTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAAC 30232
|||||||| || | ||||| || || | ||||||
Sbjct 345518 TTCCAAAAAACACGTTTGGTGGTCAGCAATGGAAAC 345553
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406116659028172
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |