Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02] 9,402 sequences; 286,766,519 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq30 87.8 1e-12 >seq30 Length=458414 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 30076 || || | ||| || || || ||||| ||||||||||| || || |||| | ||| Sbjct 345338 AAGTGACGCCATTGAAAGCCATACACAGGTCCCAGGTCACCTTCCTCCCGATCAGTGAAT 345397 Query 30077 CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCG 30136 ||| | ||||||| || || |||||| ||| | ||||| || | || || || | Sbjct 345398 CCCATTTTGTCCAGGAATTCCCTGGAAGAGTTTCCATCCCAAATGTGAACTCCTTTAGCT 345457 Query 30137 GAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCC 30196 ||||| || | ||||| | || | || |||||||| ||||||||||| | | Sbjct 345458 TTCAGCTCATTTGCATTTGTACATCCCTTCACAAACCACAGAAGCTCCTCCACAATTCCT 345517 Query 30197 TTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAAC 30232 |||||||| || | ||||| || || | |||||| Sbjct 345518 TTCCAAAAAACACGTTTGGTGGTCAGCAATGGAAAC 345553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406116659028172