Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02]
9,402 sequences; 286,766,519 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq1672 150 2e-31
>seq1672
Length=38749
Score = 150 bits (166), Expect = 2e-31
Identities = 155/203 (76%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 4817 AATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTG 4876
||| || ||||| || | ||| |||||||| ||||| | |||||| || ||||||||
Sbjct 32243 AATGTACGTGTCAATCAAAAGGGAGTACATTTCGGAATGCACATTTTCCATCGCAATCTG 32184
Query 4877 AAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAA 4936
||||||||||||||||| ||||| || ||||| ||||| | | |||| || || ||
Sbjct 32183 AAATCCGTAAAAGCATCGGGCTTCGGTGACTTGCACTTCCTGGCTGAATCGCTCCACCAA 32124
Query 4937 GTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTA 4996
||||||||| || || || ||| |||||||| || ||||| ||||| || ||||| |
Sbjct 32123 GTTTTCGTTAACAATTCCATCAGATGCTGCAAAGAAGGCCAAGACATGGGAAATAAATTT 32064
Query 4997 CTGTTCGTCAGGCTTAAGTTTTT 5019
| ||| || ||||| || ||||
Sbjct 32063 CCTTTCATCCGGCTTCAGCTTTT 32041
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427000665720866
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |