Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02] 9,402 sequences; 286,766,519 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq30 109 4e-19 >seq30 Length=458414 Score = 109 bits (120), Expect = 4e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27499 TACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCC 27558 ||||||||||| || || | |||||| || || ||||| ||||||||||| || || ||| Sbjct 345326 TACTCTGCTCCAAAGTGACGCCATTGAAAGCCATACACAGGTCCCAGGTCACCTTCCTCC 345385 Query 27559 CTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTT 27618 | | ||| ||| | ||||||| || || |||||| ||| | ||||| || | Sbjct 345386 CGATCAGTGAATCCCATTTTGTCCAGGAATTCCCTGGAAGAGTTTCCATCCCAAATGTGA 345445 Query 27619 ACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCC 27678 || || || | ||||| || | ||||| | || | || |||||||| |||||| Sbjct 345446 ACTCCTTTAGCTTTCAGCTCATTTGCATTTGTACATCCCTTCACAAACCACAGAAGCTCC 345505 Query 27679 TCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAAC 27726 ||||| | | |||||||| || | ||||| || || | |||||| Sbjct 345506 TCCACAATTCCTTTCCAAAAAACACGTTTGGTGGTCAGCAATGGAAAC 345553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369464859324662