Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orchesella_20cincta_20[genbank_20GCA_5F001718145.1_202016-09-02] 9,402 sequences; 286,766,519 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq1326 120 4e-22 seq1672 114 2e-20 >seq1326 Length=48828 Score = 120 bits (132), Expect = 4e-22 Identities = 132/176 (75%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 77127 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 77186 |||||||||||||| || ||||| | || |||||||| || |||| ||| | || Sbjct 34366 TGAAATTCTCCAGATAACACTCTCCTCGTATAAATATTTGAAGTGTATGCTTCAATGGAC 34307 Query 77187 TCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTA 77246 |||||||| ||||||||||| |||||||| ||||| ||||| || |||| | |||| | Sbjct 34306 TCATTGTTGCCCAAAATTTGGGCAGTAGATGCAGTAGGCATTGGAGCCAAAAGTAAAGAA 34247 Query 77247 TTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATC 77302 |||| ||||| ||| || ||||| | ||||| | ||||||||| | ||| Sbjct 34246 TTTCGAAGACCGTGTTGACTTATTTTCTGTTTTAAACTGGACCAATCCCACAAATC 34191 >seq1672 Length=38749 Score = 114 bits (126), Expect = 2e-20 Identities = 135/183 (74%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 48401 ATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGC 48460 ||| |||| ||| || || || ||||| ||||||||||| || | |||||| || || Sbjct 32249 ATCCTTAATGTACGTGTCAATCAAAAGGGAGTACATTTCGGAATGCACATTTTCCATCGC 32190 Query 48461 CATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTC 48520 ||||||||||||||||| |||| ||||| |||| || || ||| | ||||| || Sbjct 32189 AATCTGAAATCCGTAAAAGCATCGGGCTTCGGTGACTTGCACTTCCTGGCTGAATCGCTC 32130 Query 48521 AGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAAT 48580 |||| || || || || ||||||||| || ||||| || || || ||||| ||| Sbjct 32129 CACCAAGTTTTCGTTAACAATTCCATCAGATGCTGCAAAGAAGGCCAAGACATGGGAAAT 32070 Query 48581 AAA 48583 ||| Sbjct 32069 AAA 32067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694587159049280