Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orussus_20abietinus_20[refseq_20GCF_5F000612105.1_202014-04-05] 936 sequences; 201,220,334 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq88 136 3e-27 >seq88 Length=2672896 Score = 136 bits (150), Expect = 3e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 102037 ATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATC 102096 ||||| ||||| |||||||||||||||||||| || || || || ||||| ||||| || Sbjct 1502813 ATATTTGGCTCCAAAATGCCTCCACTGAAATCCGTAAACTGGGCCCAGATCGCCTTCTTC 1502754 Query 102097 TCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTG 102156 ||| || ||||||| |||| | ||| || | ||| | ||| || | |||||||| Sbjct 1502753 TCTATCGATAAAACCACAACTATCAAGAAAAGACCGAGAGCTATTGGCGTTCCAAATGTT 1502694 Query 102157 CACGCCAGCTGCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTC 102216 || || |||| || ||| || | |||| | ||||||||||||||||| || || Sbjct 1502693 GACACCCTTCGCTGCTAACTCCTTTGAATTAGTACAGCCTCTGATAAACCACAATAGCTC 1502634 Query 102217 TTCAACAACACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGGAAA 102264 ||||||| | ||| |||| || | || || ||||| | |||||| Sbjct 1502633 CTCAACAATAGCTCGCCAATTAACACGTTTTGTGGTTAATAATGGAAA 1502586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361247079026936