Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orussus_20abietinus_20[refseq_20GCF_5F000612105.1_202014-04-05] 936 sequences; 201,220,334 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq88 129 4e-25 >seq88 Length=2672896 Score = 129 bits (142), Expect = 4e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 97401 ATATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTC 97460 ||||| ||||||||||||||||| || ||||| ||||| || || || || |||||||| Sbjct 1502813 ATATTTGGCTCCAAAATGCCTCCACTGAAATCCGTAAACTGGGCCCAGATCGCCTTCTTC 1502754 Query 97461 TCTATCACAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTG 97520 |||||| |||||| |||| | | | |||| ||| | ||| || | |||||||| Sbjct 1502753 TCTATCGATAAAACCACAACTATCAAGAAAAGACCGAGAGCTATTGGCGTTCCAAATGTT 1502694 Query 97521 CACACCAGATGCTGCAAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAATTC 97580 ||||| ||||| | ||| || | |||| | ||||||||||||||||| | || Sbjct 1502693 GACACCCTTCGCTGCTAACTCCTTTGAATTAGTACAGCCTCTGATAAACCACAATAGCTC 1502634 Query 97581 TTCCACAACACCTCTCCAAAATACTCTCTTAGTTGTTAAGAGAGGAAAA 97629 || |||| | ||| |||| || | || || ||||| | |||||| Sbjct 1502633 CTCAACAATAGCTCGCCAATTAACACGTTTTGTGGTTAATAATGGAAAA 1502585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346780044061520