Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Orussus_20abietinus_20[refseq_20GCF_5F000612105.1_202014-04-05]
936 sequences; 201,220,334 total letters
Query= NC_002188.1
Length=288539
Score E
Sequences producing significant alignments: (Bits) Value
seq25 86.0 1e-11
>seq25
Length=4911174
Score = 86.0 bits (94), Expect = 1e-11
Identities = 123/171 (72%), Gaps = 2/171 (1%)
Strand=Plus/Minus
Query 189164 AGTAACTTATCTCCGTGGCTACATTTTGGTCATG-TATCCGCACAACGTGTTGCCTTAGA 189222
||||| || || |||||| | || |||||| ||| |||||| ||||| | | ||||
Sbjct 4899804 AGTAATTTGTCACCGTGGTTTCACTTTGGT-ATGATATCCGTTCAACGGTGTATCATAGA 4899746
Query 189223 AGTATTAAAATGTATACGAGAAAGCaaaaaaaaCGTTGAAACGTTTATAGATGAAATAAT 189282
||| ||| | || | | || ||| || ||||||| | ||||| || ||| |||
Sbjct 4899745 AGTGCAAAAGTATAAATGTAAATTCAAGCAATCCGTTGAAGCCTTTATGGAAGAAGCAAT 4899686
Query 189283 TGTAAGAAGAGAACTATCGGATAATTTTTGTTACTATAACAAACATTATGA 189333
| | ||||| ||| || ||||||||||||| |||||| || |||||||
Sbjct 4899685 TATCAGAAGGGAATTAAGTGATAATTTTTGTTTCTATAATGAAAATTATGA 4899635
Score = 84.2 bits (92), Expect = 4e-11
Identities = 70/86 (81%), Gaps = 0/86 (0%)
Strand=Plus/Minus
Query 189624 TAGGTTGTATGTGGTCTATTTGCGGATTACACGATAGAGCGTGGAAAGAAAGACCGATAT 189683
|||| ||||||||||| ||||| ||| | || ||| || |||||| |||||| |||
Sbjct 4899143 TAGGCTGTATGTGGTCAATTTGTGGAATTCATGATCAAGGGTGGAAGGAAAGAAATGTAT 4899084
Query 189684 TTGGAAAGATAAGATATATGAATTAT 189709
||||||| ||||| ||||||||||||
Sbjct 4899083 TTGGAAAAATAAGGTATATGAATTAT 4899058
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 923185998597440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |