Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orussus_20abietinus_20[refseq_20GCF_5F000612105.1_202014-04-05] 936 sequences; 201,220,334 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq38 95.1 1e-14 >seq38 Length=2292016 Score = 95.1 bits (104), Expect = 1e-14 Identities = 118/159 (74%), Gaps = 2/159 (1%) Strand=Plus/Minus Query 14474 ATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGA 14533 || || || || || |||| |||||||||||| || | ||||||||||| | || Sbjct 218944 ATATAAGTGTCTATTAGTAGAGAATACATTTCAGAATGAACATTTTCCATAGCCACTTGG 218885 Query 14534 AAACCATAAAAACATCTAGCTTCTGACCATTGTACCT-CTGAGTAAAATCTTTCGGCCAA 14592 || |||||||| |||| |||||| | |||||| | |||| | ||| | ||| | | Sbjct 218884 AATCCATAAAAGCATCGAGCTTCCGTAACTTGTACTTCCTGACT-AAACCGTTCTACAAG 218826 Query 14593 ATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGC 14631 ||||||||| || ||||||||| ||| ||||| ||||| Sbjct 218825 ATTTTCATTGACGATACCATCAGAAGCAGCAAAGAATGC 218787 Score = 86.0 bits (94), Expect = 6e-12 Identities = 67/80 (84%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 13913 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13972 || |||||||||| |||| | || |||||||| || ||||| || || || || |||| | Sbjct 219768 TTCTGATATTCACCAACTTTCTTCTCAAAGAAATTTGTTTTTCCCTCAAGGGAAATATGT 219709 Query 13973 TCCATAAAATCAAATGGATT 13992 |||||||||||||||||||| Sbjct 219708 TCCATAAAATCAAATGGATT 219689 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482339956556480